Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0222C02_T7_398574

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0222C02_T7_398574
Primer
T7
ID from Seq. Facility
LE_HBa_222_C02-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
552 trimmed for vector and quality, 927 raw
Sequence
>LE_HBa0222C02_T7_398574 (raw untrimmed)
GGCAGGCTGCAAGCTTGGACTCCTCAATTTGTTGAGCATACTCCATGAGCCTAGAGGTATCAAAAAATATTATGCCATCCGAGACACTCATAACATCAAG
AGAAATGCAACTTATACTAACTATGCAAGACGCTAACCCACTACTAAACCACTAAGGATATGGTCGCAAGCTTGAATAACAATGCAAAGAAAGATAATGG
TATCAACTACCTTTGTACCTAACTCATTCTCCCCCTCTTAGGCTAAAACGATCTTCAAGGTCTCATACTTCAAAGTACCATTATACCTCTCACACGGTAG
GAACTCATACTACCCTTAACTCATGCTCATAGAGACTAATCATTTATCTTACAAGTCAATCATAACACCCTCCCCTTAGGATTCAATCTAGAACAACACC
CTTAAGGATTACCTCGCTCAAGTCTTAGGCATAACATATCTCAGCTCATGGAATACAATACCTTCTTTCTCACAAAATTACCATATTCTTTCAACACTCT
TCAAATTTCCACCTTAATATTTCTACCTATAATTGTACACAACTATAAGACATCTCATTTTCCCCCAGAAGGAATTTATTCAATCATTTTAAATCTTACC
ATGCCTAGAACTACATCACTATACAATTTCATATCATAATACTTCCCAACTCATAAGTCATACACAACAATAAATGGCATCACATCACAATCCTCAAAAC
TAATCTACACTTCTACTCTTCTAGCCCAAAAACTATCATAGGCATTCAAACTTCACTTTTCTTTCCTTAAACCCGAAAACCCCNTCCCTTTTGAAGTTTT
TACTTCCAAAAAACTTGCCGAACAAGGGAAAAAAAAAAAAAAAACTTTTTGGAATTTATTTTTATTGATACCATTCCGGGAGTAATGGAAAAATGGGGAA
AACTTATTATTTCTTTAACCCCTTTAA
>LE_HBa0222C02_T7_398574 (trimmed for quality and cloning vector)
TGCAAGCTTGGACTCCTCAATTTGTTGAGCATACTCCATGAGCCTAGAGGTATCAAAAAATATTATGCCATCCGAGACACTCATAACATCAAGAGAAATG
CAACTTATACTAACTATGCAAGACGCTAACCCACTACTAAACCACTAAGGATATGGTCGCAAGCTTGAATAACAATGCAAAGAAAGATAATGGTATCAAC
TACCTTTGTACCTAACTCATTCTCCCCCTCTTAGGCTAAAACGATCTTCAAGGTCTCATACTTCAAAGTACCATTATACCTCTCACACGGTAGGAACTCA
TACTACCCTTAACTCATGCTCATAGAGACTAATCATTTATCTTACAAGTCAATCATAACACCCTCCCCTTAGGATTCAATCTAGAACAACACCCTTAAGG
ATTACCTCGCTCAAGTCTTAGGCATAACATATCTCAGCTCATGGAATACAATACCTTCTTTCTCACAAAATTACCATATTCTTTCAACACTCTTCAAATT
TCCACCTTAATATTTCTACCTATAATTGTACACAACTATAAGACATCTCATT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.9367
Expected error %
1.33709
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0222C02
Clone
Clone name
hba-222c2
LE_HBa0222C02
P222C02
Clone type
BAC
Contamination
none
Estimated length
136,138
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found