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Clone Read LE_HBa0222C02_SP6_398572

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0222C02_SP6_398572
Primer
SP6
ID from Seq. Facility
LE_HBa_222_C02-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
623 trimmed for vector and quality, 970 raw
Sequence
>LE_HBa0222C02_SP6_398572 (raw untrimmed)
NGCAAGTCAGACCCCTTGGATTCATCGCTTGCGGTTCGTGGCTGTTACACTTAACCCCCCTTAGGCTCTCATACTACTTGTAGCGGTCCAAGCCTAACTG
TCTAGTATTCTTCGCTGCGGCTCAAATTTTGTGCCTCACAGTAGTGTCCCTTTCAATTTTAACCCAAAAGACACCTCAAGAGTTGAATTCCTGGTTCCAC
CACGTATGGTCCTAAACTTTCCCCTCCTATTTCGATATCGGATTTTCCCAAGGGGCACTTCAATCCTCAACTGGTAGCGGTTCTTGTGCCATCACACTAA
AATGTTGCACCCTGTAAATATTGGATAACTTTTGACACAATTTAATGCTTTGTAGTTCAGTTTTATTAGGTTAAGCTGTTGGGGATAATGGAGTTGTTGT
AACTGATGTTGAAATAATGTGATGTCTATCTAGAACTTAGTTAAAGTTGGTTGGAATGAACCTTTGAGTTATTTACCTCAAGTGTAGTCCTTTCATTTTA
TACAATTTGAGAAATGTAAATAGGGAGCTAGTGTGTTGACTTTACACAACAGTTAATCATACTTTGTCTTTTTATGACCCCAAACATTTATCTCCCATGC
TAACGAGGGGATTTGCAGAAGCATGCTTCCCTAGATACTGTCTTTTAGTTCAGCACTAGTGGTGTTCATGTGTTGATAACTCACCCCCTTCGGGTCTCGC
TTAAGGTTTCCCCACCACCGTGCTAAGGAAAAGTGTTAATTATGACCCCACATGTAGCGGCCCCAGCCCAATTTCCAAAAAAAATGTTTTGCTCCTGCCC
AATCCCTCTTTACTTCAAAAAGGAAATTTCTACTTTTAAATTTTAAAATTTAGAATTCTTACCCAAATTTATTCTCAATGGAAACTTTTTTTTTAGAATA
GTAATTAAAAAATTTTTTTGGGAAACCCCCACTAAAGCTAAAGGGTGTGAAAAATGAGTAAAGGGAAATT
>LE_HBa0222C02_SP6_398572 (trimmed for quality and cloning vector)
ATCGCTTGCGGTTCGTGGCTGTTACACTTAACCCCCCTTAGGCTCTCATACTACTTGTAGCGGTCCAAGCCTAACTGTCTAGTATTCTTCGCTGCGGCTC
AAATTTTGTGCCTCACAGTAGTGTCCCTTTCAATTTTAACCCAAAAGACACCTCAAGAGTTGAATTCCTGGTTCCACCACGTATGGTCCTAAACTTTCCC
CTCCTATTTCGATATCGGATTTTCCCAAGGGGCACTTCAATCCTCAACTGGTAGCGGTTCTTGTGCCATCACACTAAAATGTTGCACCCTGTAAATATTG
GATAACTTTTGACACAATTTAATGCTTTGTAGTTCAGTTTTATTAGGTTAAGCTGTTGGGGATAATGGAGTTGTTGTAACTGATGTTGAAATAATGTGAT
GTCTATCTAGAACTTAGTTAAAGTTGGTTGGAATGAACCTTTGAGTTATTTACCTCAAGTGTAGTCCTTTCATTTTATACAATTTGAGAAATGTAAATAG
GGAGCTAGTGTGTTGACTTTACACAACAGTTAATCATACTTTGTCTTTTTATGACCCCAAACATTTATCTCCCATGCTAACGAGGGGATTTGCAGAAGCA
TGCTTCCCTAGATACTGTCTTTT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.962182
Expected error %
0.288338
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0222C02
Clone
Clone name
hba-222c2
LE_HBa0222C02
P222C02
Clone type
BAC
Contamination
none
Estimated length
136,138
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found