Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0238D05_T7_398322

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0238D05_T7_398322
Primer
T7
ID from Seq. Facility
LE_HBa_238_D05-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
284 trimmed for vector and quality, 924 raw
Sequence
>LE_HBa0238D05_T7_398322 (raw untrimmed)
NNTTACTGCAGGGGATCCCAGAGCCACCTGGAGCAGCAAGCTTTCATAATTTCATGTGTCCCTCTTTTTGTAGATTAAGTCAAGTTGTTCATGCGTTGAG
TAGAGCCAAGGTAGGTACTTTTTATTACTCTTTTTCTAGCTTAATTTGTTGTTAGCATTCCAATTCGCATACTCATACATTCAATGTATTGATACCAATT
GGTCTGCATCGTATTATGATACAGATGTAAGTAACCAGGATATGCGTCATTCAACGCCTCGTTGATCCAGCTAAGCACTTGGAGTAAGTGGTGAGCCTCC
TTGCATTCTGGAGGTAACATTTATTTCTTTTTTGTCTTTCTTTTTGTAGGATGTTGTGAGGTCTGTCACAACATCCGTCTTCTTATTATAGAGGCTTCAT
AGACAGATCAAACAGTTAGTATTGAATCACATCAGTTTGTATTACCGATATTTTGTTATGAGATCTTAGTGTAAATTTGGCCAACTTATTTTATTTTAAG
TTAATGGAGGATTCTATTTCTTAAAAATTAAATTTTTCCAAATTATTTACTAAAAATTTATCTATGTATATATATATTTAATAAACGTATCTTTAATACG
TCTACTCACTTTTTGTGTGTAAATCATTGCCTTTGAATTAGATTTATCAACATTTTTGTACATTAAGTTTTTTTTTAATCATTGTCCAATAATTATTTTC
GTATTAAATTATTATATAATAATCAATACTGTTAAATTATAAATTAAATTATATCTTATTAATTATCTAATTCTAATACAATTATTAATATAAATATTAA
TTTATTTTATTCTTAATTAGATGAATTAAAGCATAATACATACCTTTACTTTCAGTTGTCATCTTAAAAATCTTTTAATACACATAAAAAATAAAGATTT
TATAAATAACAAATCTATTACAAA
>LE_HBa0238D05_T7_398322 (trimmed for quality and cloning vector)
AAGTCAAGTTGTTCATGCGTTGAGTAGAGCCAAGGTAGGTACTTTTTATTACTCTTTTTCTAGCTTAATTTGTTGTTAGCATTCCAATTCGCATACTCAT
ACATTCAATGTATTGATACCAATTGGTCTGCATCGTATTATGATACAGATGTAAGTAACCAGGATATGCGTCATTCAACGCCTCGTTGATCCAGCTAAGC
ACTTGGAGTAAGTGGTGAGCCTCCTTGCATTCTGGAGGTAACATTTATTTCTTTTTTGTCTTTCTTTTTGTAGGATGTTGTGAG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.942949
Expected error %
0.209548
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0238D05
Clone
Clone name
hba-238d5
LE_HBa0238D05
P238D05
Clone type
BAC
Contamination
none
Estimated length
95,259
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found