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Clone Read LE_HBa0238D05_SP6_398320

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0238D05_SP6_398320
Primer
SP6
ID from Seq. Facility
LE_HBa_238_D05-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
652 trimmed for vector and quality, 872 raw
Sequence
>LE_HBa0238D05_SP6_398320 (raw untrimmed)
NCCGTACGNATATAATCCACATAGGGTTCCCGTGAACTCAAATTCTTCACGTTGATTAGCATACCTTTTTGGTTTGGAACTTTGGGTAACTAAATCCCAC
ATGGCCTTTTTAGGATAAATAGGAGATTCCTGAGCTGCAGAAGAATATGAAACTATGAAGCCATCAATATCCTATAGTGTTGGCATCTCTCCAAAATATT
TTCTTTTGTACCTTCCTCGAGTTCTTTGAGACTGCAGATGGAACAAAAGTTAGATGTTTGATTTAAGTGTGAACTACCAAAAAAATTGGAGAGTAGAATT
TACAAAATATTTGGAAAGAAAAATGCTTTATAGGAAAAAAACTCATATACTTACAAAAGGAGAGAAGATGTACTTGCTCTACAAATGAACATATGAACTA
GCTGAATAGGTGATTCCAATTTGTTCATCTAGAACAAGAAGGTGGTTTCCCAGCTAACTGTAACTTGCTTGTTCACTCTGCATCGACGAAATCAATTTTT
TCTTAAAGTCAATAAGTCATTCCAAGACATATGTCAATTTCAACAAAAATATCTTCAATTTTATTTTCCCATTCTTCTTTCTTTGGGGCAAGAAGTTCCT
CATCGTCAAATCAGAATGTTAAAGGAAGTGTTCCTCTGACCGAAACTTTTTCCTTCTCTTCAGGAGAAGTTTGTTTATTATGAACATCAATATATTTATT
GAATTAACAATTAACTTCAAAAACCCGAACTCTTCAATAACCTTCATCTAATTATTTTGAAGATCATTAATTCAAATATCAAAACTTTTGCTAAAAAATA
TAAGGTTGTATCCGGAAAATTGGATAGTCTGCTAACCCAATCAGGCCTTAGGGTTCTAGAATAAACCCCATA
>LE_HBa0238D05_SP6_398320 (trimmed for quality and cloning vector)
GGGTTCCCGTGAACTCAAATTCTTCACGTTGATTAGCATACCTTTTTGGTTTGGAACTTTGGGTAACTAAATCCCACATGGCCTTTTTAGGATAAATAGG
AGATTCCTGAGCTGCAGAAGAATATGAAACTATGAAGCCATCAATATCCTATAGTGTTGGCATCTCTCCAAAATATTTTCTTTTGTACCTTCCTCGAGTT
CTTTGAGACTGCAGATGGAACAAAAGTTAGATGTTTGATTTAAGTGTGAACTACCAAAAAAATTGGAGAGTAGAATTTACAAAATATTTGGAAAGAAAAA
TGCTTTATAGGAAAAAAACTCATATACTTACAAAAGGAGAGAAGATGTACTTGCTCTACAAATGAACATATGAACTAGCTGAATAGGTGATTCCAATTTG
TTCATCTAGAACAAGAAGGTGGTTTCCCAGCTAACTGTAACTTGCTTGTTCACTCTGCATCGACGAAATCAATTTTTTCTTAAAGTCAATAAGTCATTCC
AAGACATATGTCAATTTCAACAAAAATATCTTCAATTTTATTTTCCCATTCTTCTTTCTTTGGGGCAAGAAGTTCCTCATCGTCAAATCAGAATGTTAAA
GGAAGTGTTCCTCTGACCGAAACTTTTTCCTTCTCTTCAGGAGAAGTTTGTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.939488
Expected error %
0.621943
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0238D05
Clone
Clone name
hba-238d5
LE_HBa0238D05
P238D05
Clone type
BAC
Contamination
none
Estimated length
95,259
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found