Clone Read LE_HBa0234I17_T7_392428

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0234I17_T7_392428
Primer
T7
ID from Seq. Facility
LE_HBa_234_I17-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
128 trimmed for vector and quality, 991 raw
Sequence
>LE_HBa0234I17_T7_392428 (raw untrimmed)
GTACTCTATGTCGACTGCAGGCGTGCAAGCTTGAACTCGAAAGCTCTAGGTAAGCAAGAAACGACATCATCTCCGACCACGTTATTTATTTGAGGAATAA
CCCAATTGGGTGTGTCGAAAATTTAAATTTAAGTTTTTGAATGACTTTTAAGGAATTGAAGAAAGTTGATGATTTTTATATATCAAATGCACTTTTGACC
TTATTAACTAAATCAAATTAGATCATAAATGCCACAACAAAAAATTGATTTCACACCTATTATTTTTTTGGGTTGCACTTTCTTCGATTCCTTAAAACTC
CTCCAAAAACTTACATTTCAATATTTCTAAACAACCTTTTTGGTTTTTCCTCATCCACTTGATGGGATAGAGGATAATCTTGCTTCTTATTTAACCTGAA
TTCTCGAGTTCCTCCTTTGATTATGAAAAAAATTTCTCGAGAGATTGGTTCTTTCTTTTTCATACCCCCTACCCTATTCTAACTCACACTACTCTAATTT
TACTGCCGACTGTCAGCACTGTTATATCTTCCGTATCAACACTACCATTATGTTCACTGTCAATTACCCATCGAACAAGCGGATTTTATTCTATTACATA
CGAGTGTATACAATTGCAGGTTTCATGTGGGTGAGAATTGACCGTGTAACCGCCATCCCCCCTTCCACGTTGCCATCCCGTGCTCCTCCCTACTCCTCTC
CCGTCGTTGCTGAATTGCCCTCTTCTCAACCAAATTTCCCCTCCCTCCCTCAAAACGTCATGTCCCCCTCCTCCTTCTCTCCCTCCCCTTCCTCAGTGAT
CTCCCCTTGCCGCTGGGTCTCGCGTTCATACCCCCCAACTTCCGTGTTCCCTCTGCCCCTTTTTACCTCCCCCCTGTCCCGGCACCTCCCCCCTTCGCTC
TGACCTCCACTTCCCAGGCGTCCGTAATCTTCGGGCTCTCCCCTTTGTTCTTAATCATCCTCACTCCATATTCCCACTTTTTCTTCTGTCT
>LE_HBa0234I17_T7_392428 (trimmed for quality and cloning vector)
CTTGAACTCGAAAGCTCTAGGTAAGCAAGAAACGACATCATCTCCGACCACGTTATTTATTTGAGGAATAACCCAATTGGGTGTGTCGAAAATTTAAATT
TAAGTTTTTGAATGACTTTTAAGGAATT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.908033
Expected error %
1.46088
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0234I17
Clone
Clone name
hba-234i17
LE_HBa0234I17
P234I17
Clone type
BAC
Contamination
none
Estimated length
111,380
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found