Clone Read LE_HBa0115J03_T7_39221

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0115J03_T7_39221
Primer
T7
ID from Seq. Facility
LE_HBa_115_J03-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
762 trimmed for vector and quality, 881 raw
Genbank Accession
DU085421
Sequence
>LE_HBa0115J03_T7_39221 (raw untrimmed)
ACAAACTCGGTACCGGGGGATCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTCTTAATAATTGCTTTGTGACCATCTAAATCAAACATACTTAACCATG
GTAAGTAATCTGATATCCCAAAACAATGAAGATATTTAAGTAGTGTAAAAAGTGCATCAACTTGTTGTTCATCTTCTTCTCTACTTGCAAATAATGATCT
CTTGTTGTAAACCATATTTCTTATAGCATTCCCACAATAACATCTTGTCACTTTCCTCAAATTTATAAATTGTTGGTTGATGCATTGCTTGTAAACAAAC
TCAACAAGGTCATCAATGGCTTCGTCCCTTTTAGGACGAAGCCATTGCAATGAGGATGGTGATAAGACATGAGAAGCAAGAATTTTCCTCATTTTCATCC
ATTGATCACCAATGGGGAGAAAAACAGAAGTTAAGTAGTTATTACTAATAAGCTTCGCGGACATACAAATAGGCCTAGATGAAAAAACGGAGTCTTGAAT
CTTCAAGAACTCGCAAGCAAGCTCAGGAGAAGTTACAGGAATTACATGAACATTGCCAACATAAATGCAAGCAATTTCAGTGTTCATTTCCTCCATAGTT
TTGTGAATCCAATAAACAAAGGATGACTTATTCTTTGTGAAGATTTGAGGAAGGATTCCAATTATAGGCCATGATTTTGGACATGGAGGAAATGATTTAT
TGTTTCTTACCAATTTACTATTCCATTTACTAAGAATAGTAGAAATGATAATTTTCCATAGAGTAGTATTGTTATTGGATTTTGAGAAAGTTGAGAGGAC
GTTGTAAATTACCATAGCTTTTTAATGTTGGAAAATAAATAAATATAATAATAAACTATTTATTTAGCCTAAAAAATAGCC
>LE_HBa0115J03_T7_39221 (trimmed for quality and cloning vector)
AGCTTTCTTAATAATTGCTTTGTGACCATCTAAATCAAACATACTTAACCATGGTAAGTAATCTGATATCCCAAAACAATGAAGATATTTAAGTAGTGTA
AAAAGTGCATCAACTTGTTGTTCATCTTCTTCTCTACTTGCAAATAATGATCTCTTGTTGTAAACCATATTTCTTATAGCATTCCCACAATAACATCTTG
TCACTTTCCTCAAATTTATAAATTGTTGGTTGATGCATTGCTTGTAAACAAACTCAACAAGGTCATCAATGGCTTCGTCCCTTTTAGGACGAAGCCATTG
CAATGAGGATGGTGATAAGACATGAGAAGCAAGAATTTTCCTCATTTTCATCCATTGATCACCAATGGGGAGAAAAACAGAAGTTAAGTAGTTATTACTA
ATAAGCTTCGCGGACATACAAATAGGCCTAGATGAAAAAACGGAGTCTTGAATCTTCAAGAACTCGCAAGCAAGCTCAGGAGAAGTTACAGGAATTACAT
GAACATTGCCAACATAAATGCAAGCAATTTCAGTGTTCATTTCCTCCATAGTTTTGTGAATCCAATAAACAAAGGATGACTTATTCTTTGTGAAGATTTG
AGGAAGGATTCCAATTATAGGCCATGATTTTGGACATGGAGGAAATGATTTATTGTTTCTTACCAATTTACTATTCCATTTACTAAGAATAGTAGAAATG
ATAATTTTCCATAGAGTAGTATTGTTATTGGATTTTGAGAAAGTTGAGAGGACGTTGTAAAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.951867
Expected error %
0.491526
Sequence Annotations 
Automatic Annotations
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At5g35917.1 Score 202 E Value 2e-52 Identity 16.10% Align. Length 653bp (85.70%) Frame 2
68418.m04317 cytochrome P450, putative similar to Cytochrome P450 79A2 (SP:Q9FLC8) {Arabidopsis thaliana}
Arabidopsis proteins (TAIR10) (ath/ATH_pep)NCBI BLAST
At5g05260.1 Score 202 E Value 2e-52 Identity 15.70% Align. Length 653bp (85.70%) Frame 2
68418.m00564 cytochrome P450 79A2 (CYP79A2) identical to SP|Q9FLC8 Cytochrome P450 79A2 (EC 1.-.-.-) {Arabidopsis thaliana}
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT11920.1| Score 203 E Value 3e-51 Identity 14.60% Align. Length 719bp (94.36%) Frame 2
cytochrome P450 [Lotus corniculatus var. japonicus]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
ref|NP_680351.1| Score 202 E Value 8e-51 Identity 16.10% Align. Length 653bp (85.70%) Frame 2
cytochrome P450, putative [Arabidopsis thaliana]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0115J03
Clone
Clone name
hba-115j3
LE_HBa0115J03
P115J03
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found