Clone Read LE_HBa0115J03_SP6_39220

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0115J03_SP6_39220
Primer
SP6
ID from Seq. Facility
LE_HBa_115_J03-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
294 trimmed for vector and quality, 765 raw
Genbank Accession
Sequence
>LE_HBa0115J03_SP6_39220 (raw untrimmed)
TAAAAAGATTCACACAATGTAATGTAAGGAGTGTTTTCGAAAGAATGGTTATGGCCTTCGTATGGTTTTCGAGACTCAGTAGAAGTCATCTAGCTGCCAA
ATGTAGTACTGTTCTATGAG
GAATGGATGCTTTCATGTGTACTTGTGAATCCTCACTGTTTGCTCTCTCTTATCTAAATTTACGAAGCCAATGATTCTCA
GTGACTGTGTTTTAGCTTTTGTCTTATCATAAATTTTGGTTTTTAAGGTCTTTGCATTACCACTTACAGGCAGAATTGGATACCAATTTAAAGGTATACC
TAGAAATTTTCTAATTGTGCATATTTATGAGTATTATTCATTACTGACTAACCAATCATATATAATAATTTCAAACAATCTTTCTTATGAATGTTGAAAT
TATTATTTATTAACAAAATTATTACTTCCTAAATCATGTTCAGATACTACTTGTGATAGGTAGTTTAGTGCACTAAAATTCATAAAATTGGAATGATAGT
TATGTACTATTTGTTTTAATACTATGATTTACTTGACAATGTCTTCTATACATTAATTGATCATAATTAGTTTAATTAGAGGATAAGAATTACCATGGCC
ATGTTTTTCATGTATAAATTGTTTATTTTTTTGCATTCCATGCTTTAATTAACGCATACTTAGGCCATTATCTTATATATCTGACTAATAAATAATAAGA
TACTATTTTCTCTGTTATCTATTTCTCTAACAATTTTTTAATAATATTCTTGAGACAGAATTATG
>LE_HBa0115J03_SP6_39220 (trimmed for quality and cloning vector)
GAATGGATGCTTTCATGTGTACTTGTGAATCCTCACTGTTTGCTCTCTCTTATCTAAATTTACGAAGCCAATGATTCTCAGTGACTGTGTTTTAGCTTTT
GTCTTATCATAAATTTTGGTTTTTAAGGTCTTTGCATTACCACTTACAGGCAGAATTGGATACCAATTTAAAGGTATACCTAGAAATTTTCTAATTGTGC
ATATTTATGAGTATTATTCATTACTGACTAACCAATCATATATAATAATTTCAAACAATCTTTCTTATGAATGTTGAAATTATTATTTATTAAC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.903773
Expected error %
0.122687
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0115J03
Clone
Clone name
hba-115j3
LE_HBa0115J03
P115J03
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found