Clone Read LE_HBa0215P04_T7_389382

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0215P04_T7_389382
Primer
T7
ID from Seq. Facility
LE_HBa_215_P04-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
22 trimmed for vector and quality, 951 raw
Sequence
>LE_HBa0215P04_T7_389382 (raw untrimmed)
NGGTACTGTCGGGGATCTCTGAGTCACCTGCAGGCATGCAAGCTTTAATTGGAACCATGTCTATATTATAGACCGTGAAATTTCTTAGGGAAAACACAGT
GATGGTTGTGTTGAAAGAATTGGCCATTCTGCTGTTGGTCAACATGCTACTGCTATATGTGCCCCCCGTATTATATGGAATAGTGAATAAACACGAAGTG
ATTGTTCAATTATACATACAGGAATTATAGATCTCAGTGGTAATAATCTAGCTGGTGTCAACTTGAAATGTTTGAATGATACAAGTAGAAAGGTACTCCA
TGTAAATACCCTAGATTATTAGGATTCCTCTGTAAGAGAACTGCATGCTAGCATCAACCACCCCATGACACCACAACAGAAAACTGATGAGCTGGTGAAG
TCCACCTAAAGCTGTGAAATCAATGATCATAATGGTATGGAGTTAGCTGGTGCTCATCTTATTACTTTCGAGGTGAACATTAATGATGGCTATCACTTTT
CTAGTTCGCCTCCTAGGCCTCAGAGACTGGAAATTGACGCATGTATTCCCATCTCCCAAAAAGTTAATAATAGCGCCGATGATCTCATCAAAAATGTTCA
TCAACATAGAAATACGACTACGGACAGAGATGGAAACATCTTTGGAAGTGGTAATATTCGCACGGTAGACAATTTCAGTTAATGCAGTACAAGTTATTGA
TTACGACGAATTACTCTTGTTTGATTTTACCAATCCCCCCTTTCTCTTGTCCAGACCCATCCTGGATTTTGCCCACTTGCGGAGGAATTTATGGATCACT
ATTTTATATAGAAGAATTTTCCGCCTAAATTTACCCAGAATTTAGATTTAAATGGACCTCCTTCACCTACCTTTCTCTTCCCAAAAGTTGTCCGCAATTT
GTGTATGCTTTTGCCGGGTCCAGACCAAAGTACATTTTATCCTATCCATTT
>LE_HBa0215P04_T7_389382 (trimmed for quality and cloning vector)
ACCTGCAGGCATGCAAGCTTTA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for contaminants
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.408538
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0215P04
Clone
Clone name
hba-215p4
LE_HBa0215P04
C07HBa0215P04
P215P04
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found