Clone hba-215p4

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Clone
Clone name
hba-215p4
LE_HBa0215P04
C07HBa0215P04
P215P04
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII
Ordering Information
BAC Clones
BAC clones can be ordered from the clone ordering page at TFGD
Physical mapping  
Fingerprint Contig Builds (FPC) 
not present in Tomato FPC (AGI 2005)
Marker matches - overgo what's this?None
Marker matches - BLASTNone
Marker matches - manualNone
Physical map (from marker matches)Not on Physical Map
FISH map 
View on FISH map chromosome 7
FISH images 
SC Spread IDImagesDistance from centromere
(percentage of arm length)
108-01 1CompositeFluorescencePhase100.0%
108-06 1CompositeFluorescencePhase100.0%
108-07 1CompositeFluorescencePhase100.0%
108-15 1CompositeFluorescencePhase100.0%
108-21 1CompositeFluorescencePhase100.0%
108-22 1CompositeFluorescencePhase100.0%
108-23 1CompositeFluorescencePhase99.0%
108-25 1CompositeFluorescencePhase100.0%
108-26 1CompositeFluorescencePhase100.0%
108-28 1CompositeFluorescencePhase97.7%
108-38 1CompositeFluorescencePhase100.0%
108-41 1CompositeFluorescencePhase100.0%
Mean±sd99.7%±0.7%

Given an estimated length of 10.8µm for chromosome 7Q and the mean percentage above, this BAC is approximately 10.8µm±0.1µm from the chromosome centromere.

1Experiment conducted in the lab of Stephen Stack at Colorado State University.
IL MappingNone
Sequencing  
This clone is being sequenced by the Chromosome 7 Sequencing Project. (View projects)
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Sequencing Project
Chromosome 7
HTGS phase
3 - finished
Sequencing Status
complete
Sequencing Organization
not recorded
Full Sequence
122,069 bp
C07HBa0215P04.1
AC210361.2 (GenBank) 		[View]
End Sequences
Warnings
none
FTP
Chromosome 7 Sequencing repository (FTP)
Chromosome Assembly
this clone is not part of a chromosome assembly
  
Annotations  
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LE_HBa0215P04 has no browsable sequence annotations
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Seq. Center Reported Status
Estimated Length
 and  bp
GenBank Accession (version insensitive)
e.g. AP009318.1 or AP009318
Sequencing on Chromosome
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Annotations
End Sequences

e.g. crystallin
Overgo match to marker what's this?
Map
Map position
 and  cM
Chromosome / Linkage Group
  
IL Bin Mapping
Assigned to project
Mapped to chr
Mapped to bin
  
 Verification

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