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Clone Read LE_HBa0208O14_T7_385476

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0208O14_T7_385476
Primer
T7
ID from Seq. Facility
LE_HBa_208_O14-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
8 trimmed for vector and quality, 961 raw
Sequence
>LE_HBa0208O14_T7_385476 (raw untrimmed)
NTTAGTATCNCCGGGGATCTCTGAGTCGACCTGCAGGCATGCAGCTTGATCTTGCGACATCGATACTTACCTTTCTATTTGCTCGCAAGCTCCCTTAAGG
ACAACAATTATTCCTAATTCCGAGTGCGGCTTATGCTCCTAAGGCGTACTGACGACAAGATGACCATTTCTTATATGATGTTGACAGCTCAGCTATGATC
ATCATAATGCAATTAAACCTTGTGACTAATAGTCCAACTCATCATGTTCAACTGGGGAATCGGCTGCTCCACTTGTAGATAACACCTTCTTGTCCAAGGT
ACTGAACTTTCGTTTGTCTTCCTATCACCAGTCATCAATTCAATGAGATAGTATGACTGACCTTCAGTGTGACTCGCCCAATAGCGCGTCTGGAACACTC
CGAGCTTACCCCAACTCTTTCGCATGCCATCCCTATCTCATCCGTAACGCGTGACTTGGCGCTCACGATTACAACTATTGAGCAGCCAATGTAATGATAT
TCCCGATTTGCCCTAAACCGAAATACTTGATTCCAAACTTGTGCCGCCCGGAAGGCGTCACCTTGTACTAGGAGAAGTGCCGATTTCCCACTGCTATATT
AACGGTTCAGACCCGTTATCCAAAAAAACAACCCTTTTTATATTCCCTGGCAGGCGGTTTAGGTGGCCTTGGAAAATTTGAGGGTTACCGTTAACCCCTT
CCCCCCCCCTTTTTGGAAAGCTCAGCCTTTTCCCCCAAAACTGGGGGTTGACCAACAATGTGCCCTCCAAAAAAAAATTCAGGTCCTTTTTCCTTTAAAA
ATGGGTAACCCAAACCCTGTGGGTTTTTACAAAGGGGGGCAAAATTTTTCCCTTTTCCTTTTTAAACTCCCCCCTGTGGGCCCCCCCTTTTTTAAGTTTT
TTTGGGCATTTTAATCCCCCCCCGAGGGCTTTTTTTAGGGGGCGAAAAAATTTTTTTTTTT
>LE_HBa0208O14_T7_385476 (trimmed for quality and cloning vector)
AGTATGAC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
  • Not screened for contaminants
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.64683
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0208O14
Clone
Clone name
hba-208o14
LE_HBa0208O14
C12HBa0208O14
P208O14
Clone type
BAC
Contamination
none
Estimated length
84,384
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found