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Clone Read LE_HBa0220I12_T7_384797

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0220I12_T7_384797
Primer
T7
ID from Seq. Facility
LE_HBa_220_I12-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
603 trimmed for vector and quality, 1023 raw
Sequence
>LE_HBa0220I12_T7_384797 (raw untrimmed)
NTTTAGGNNNNCCTATTCGGGTTCTCAGAGTGACTGCAGCGTGAAGCTTCACCGCTTATTTCTTTGAGACTCTTTACCAACCACCTTGAGATGTGAGGTG
AAAGATATTTTACTACTTAAGCAAACTTCTCTTGTTGCAAAGTACTTCTAAAAAGGGAAAAAATTACAACATTAGATTTAAAAATACTCATTCATATAAA
ACAAATAAAATAGAGGCAAACATTAATCTTTGTAATTTTTTCATGAAATAATGGACATTCAAAATTGAAGCTCATTAGTCTTACCATGGAAAAAGATTTC
CAACAAATATAAAGGGATGGAAAGTTAATAAGACCTTTGAGTTTTAAAACAATGAAAAATGATTGTTTTTAATTAGTGCAACTTTTGAGGTGAATACTAC
AAATTAAATAGGCAGGTAAAGGCTTAAAATTTAATGGCAAATTAATGAAATACACACGACTGAAAATAATGGCAACATACTCCCTCATCCCTAATTAAAC
TGCCCACTTTTCCTTTTATATTATCTTTAATTACTTGTTCATTTTGACAAATTAAGAAATGATAAAATTTTTTACTTATTATACCATCAATTAATGAGTA
ATTGCATTGAAAAATGTAAAACTTTTCATGCACTTCATAATTAATGGTAAAATAATAAATTTATTATATTATTAATTATTTTTTTAATTAAATATGTCAA
TTAAAAAATGGGCAAGGGAGTAAATCTTTAAATATGGACTTTTTAGAGCAAAAAAAATATGAACTCCTTACAGCATAATAAATAATATGGGAATAAATGA
AAAATTAAATACTCTTCACCTCCCTTCAAGTAAAGTCCTACTATTTTCCTATACCAACCCGGTTGAAAAGTTAAAACCCCCCCAAGGGGGGCGGAAATTT
TTTAAACCCTAGGGCACCCGATACATTATAACCACCCCTTGAGATGAGGACTGATTATCGTATAAAGAACACGATTAGGGAGTCTTTTTTTTAGAATTCA
GCACTAATTATTTACCCTATAAG
>LE_HBa0220I12_T7_384797 (trimmed for quality and cloning vector)
ACCAACCACCTTGAGATGTGAGGTGAAAGATATTTTACTACTTAAGCAAACTTCTCTTGTTGCAAAGTACTTCTAAAAAGGGAAAAAATTACAACATTAG
ATTTAAAAATACTCATTCATATAAAACAAATAAAATAGAGGCAAACATTAATCTTTGTAATTTTTTCATGAAATAATGGACATTCAAAATTGAAGCTCAT
TAGTCTTACCATGGAAAAAGATTTCCAACAAATATAAAGGGATGGAAAGTTAATAAGACCTTTGAGTTTTAAAACAATGAAAAATGATTGTTTTTAATTA
GTGCAACTTTTGAGGTGAATACTACAAATTAAATAGGCAGGTAAAGGCTTAAAATTTAATGGCAAATTAATGAAATACACACGACTGAAAATAATGGCAA
CATACTCCCTCATCCCTAATTAAACTGCCCACTTTTCCTTTTATATTATCTTTAATTACTTGTTCATTTTGACAAATTAAGAAATGATAAAATTTTTTAC
TTATTATACCATCAATTAATGAGTAATTGCATTGAAAAATGTAAAACTTTTCATGCACTTCATAATTAATGGTAAAATAATAAATTTATTATATTATTAA
TTA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.889235
Expected error %
0.500731
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0220I12
Clone
Clone name
hba-220i12
LE_HBa0220I12
C02HBa0220I12
P220I12
Clone type
BAC
Contamination
none
Estimated length
71,914
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found