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Clone Read LE_HBa0114J11_T7_38469

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0114J11_T7_38469
Primer
T7
ID from Seq. Facility
LE_HBa_114_J11-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 1190 raw
Sequence
>LE_HBa0114J11_T7_38469 (raw untrimmed)
TGGCTGACATCCTCCGGGGACTGGGATTCTCCCCTTAGAAGTTCGAACCATAGCTAAGGCATTGGCTAAGCCCTTCCATGATATCTCTCTTTAATTAATG
TAGATATGCCCTATTACATAACGAAATGTGTACCTAACAGTAGCTAAATCAATCTTATGGAGCACTCTCGCTAAATGTATATTCGTCATAATCTCACGTA
TCTTACGTCCCACTACGGCTGCTTCTGCTATATATATCACGATGGTTGCTCTTTTCAGCTTCGTTAATATCATTCTTATAACGAATCTATACTAAAATCT
ATATTACTAATTCTGGCTTTCTATCACAAAACTACTCTTTGTATCTATCCATAACGTCTATTCTTCTCTCATTTCATCNTATAGTAGATCTTTCTATAAA
ACTGGTATTTGCTTTGTCTCCCATTTAACGTATCTTTGTAATATATTAAGTGTAGTCAAGTTTTGTCACATCTGTCCTCACGCGTAGCTCTTATCCTAAA
ATACTTGTATATTACCCTATGATCCTTCGTGGCCACTACTATTATATATGCCTATTTCTTATACCCACAGTTATACCATCATGCATTTACTACATATTTT
TTCTCTATTATATTAACCAATCAACTCTATCTCAGAGTATTTTTTCAATATATATTCATCTTGTAACAAAACTCTATACTGGTTCATTTAGTATTAATGT
TCTAGATATATTATACGCTTGGATTTTTATGTGTATAACACCTATCTAACACTTGACATCTAGACTACACTGCCCCTGCTTGAGCATCCTAATGTACTTT
CCCCACTCTATTATGACGTTAATTTTCTCTCCTTACCAAATTTGTACAACAATTATACTTTTATCTTTAATCATTTAGTCATTTTGCTTACTATGTCTTT
CTTCCATTTTTATTCTACGGCCCNNCCCCCGGGATTTTTTTATATGTATNGGTATTAATGGAATTTATGATTTAATATTTATAATATGTGATTTATATGA
TATGTAAATTTATTTAATATATTTTGTATTTTGTATTATTAGTGTTTAGTGATATTGTTAATGAATTTTTATGATAATANTAATTAAATATATTATATAT
ATGATATAGTTNTTTATATGTTTTAAATATAATATAAGTTAAAATATGATTATAGAAGGTGTTGATTGTTAGTAAGTTTAGAGTATTGGT
>LE_HBa0114J11_T7_38469 (trimmed for quality and cloning vector)
ATT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.1354
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0114J11
Clone
Clone name
hba-114j11
LE_HBa0114J11
C03HBa0114J11
P114J11
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found