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Clone Read LE_HBa0243L18_T7_378407

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0243L18_T7_378407
Primer
T7
ID from Seq. Facility
LE_HBa_243_L18-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1363 raw
Sequence
>LE_HBa0243L18_T7_378407 (raw untrimmed)
CGCATCATCTAATCTTCTAACTTGGACATACGCAATGTCCATGCANTCCATACATTCACACAACATGTATCATTCCCCCTCTATATACTATACCACATAA
CTCCTTATCATTCATTGATAGTAAAAATACAGCTAGTAGCACCCCACATGCAGCATCTACTTTACACAACTAAATGCTACCTATCAGTATATGGACCAAC
CAAACGCCTAATCAAGTACTCGCAAATTTCCTATAATGGCATATTCTTATACTTGTAACAATAACATCTTTCACTGTCCATCTATTTCGACGTACACTCT
TATCACACTAAATCCCATATATACCAAGTTAGTCCATTTCTTTATACTAATTCACCTGTTCTTCCTATAATAAATCATTATTTTCAAACGTGCCTAAACT
TTATCCATAAGGCACTCACCGTAATATGAATCTCATCTATAACTCTTCATATTTCATCATCTATCAGGAGACACTAATTCCATATTCTTACTCAGGCAGC
AATCTTATATTCACTCTTACTATCTTTAATACCATTCCATACTCAATCCCTTCCTAGCTAATTACTTTTGTCTGTCATCTTGCCCTTTATTTTTTTTCTG
TACTCTCCACATATCTTTCACAACATCATCCATCTATCACTCATTACCTTCCAATATCCACGCATCAAAATATGACCTCTCTAGTCACCAATCACACCTA
TCTCTCATTAATAAGCTATCATCTACCCTATGATAACTACAATTTAATAAGAACAACATCCACCAACTCCTCTTTCATGTAAACTAAACCTCCGTAATCT
ACAAACATCCTACTTTCCTACACACTCTTCATACCTACATTCAACTCTCCATATCCCTCACTAACTCATCATATCACAACATACAGGACTTTATGCTCCA
CTCTCCTATGCCCCTTTATCATATTCTCTCTACCAACAACATTTTACTTACTCCCTACTCTTCCACACCCCTATAAATCCAGTTATACCATTACATAGCC
TATATTGTATTTCATTCATATATCTCTTACACTGATACCTCCTCTTCCTTTATGATGTCTTAACCAGACTGTTCTCTACAATCTAATGTTTCCTTCCATA
AACTATCACTATTACTACCATATCCTTGCATCTCTCACTATTAAATGTTCACTCTTATGATTTATCTACACTCTATCACCACATTCATTTACCAACATTA
TACCACATCTTATCTATAAACCGAGTGCTCCTCATCAGTCTAATTATGTATAAATAATACTATTATAATATCCTCCGTCAATCCAACCTCTACATCTTCA
CAATCACTCTATCGTACTTAACCTCTAATACACATGACAATCTACCACTCAATTCTCATATCG
>LE_HBa0243L18_T7_378407 (trimmed for quality and cloning vector)
CC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for contaminants
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.95056
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0243L18
Clone
Clone name
hba-243l18
LE_HBa0243L18
C12HBa0243L18
P243L18
Clone type
BAC
Contamination
none
Estimated length
94,587
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found