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Clone Read LE_HBa0243L18_SP6_378406

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0243L18_SP6_378406
Primer
SP6
ID from Seq. Facility
LE_HBa_243_L18-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
641 trimmed for vector and quality, 905 raw
Sequence
>LE_HBa0243L18_SP6_378406 (raw untrimmed)
TAAGTGATTTTTAGGTGTAGTTTAGTAGTCCTTTAGTGGAGCGTTTTCACTCAAAATTTTTAACTTCACACCCTTTAGGAACATCACATTATTCACAACA
TTAGAACAAAAAATACAAGAATTTCCATGTCATAATACGTCCCAAAACATATATTACATCCCTGCAACACATTGCACACATACATCAACATTTCAGATGA
TTTCGAACAAGATAATCATTATTCACACAATTTTGAACATGAATACTTAAACATATAAATCAACAAAAACATTTCATCCCTACTTTGTACAACCAAACAT
ACCCAACCTAAAGTTCAATGGCAGCTAGTTACAAGGACATGCAAGGGGAAAAAATCCTATTTTGCTGAATGAATATCTTGAATCTTAGAGGGTCTATTAA
AAAATGAACAAAGAGGAAAGAAACCCATACCTTTATTTATGTTCAAGCGATGAATTTCCTTCCATAAACCCTTTCCAAAATCAGTTTAAGCTACCTTAAT
GTCCACACCACTGAACGAACAACTTCTCTTTGCGTTAGCGTTTTTGGTTGCTTTGTTTTTCTTAAAATTTCAAGTGAGTTCATCAAGTGTGAAGACTCTT
AATATTACTGCTGTTCTTTTTTGTTGTTGGCAGAAAAAATGTGAGCAAGAGAATGATGAAACATGAGAGAGAGATCCTGAGAGAGTAATTTTATAATGGG
AGTTTTAGTTTGGGAATTAGTCAAACTCTGACTCCTTATTAACTTAAAAAAAAAATCTGATTTAATTAAGTTTAGGGAATGGAACCATTTATGACCCTTA
AATATCAGGAATATAAACTATTATTTTAAATCACAAATCTTGTTGCTTTCCAATAAGGGCTCAAAACCGGGGTAAAGATGGCCCTTGTCAAAAAGGACTC
TTGCA
>LE_HBa0243L18_SP6_378406 (trimmed for quality and cloning vector)
ATTTTTAGGTGTAGTTTAGTAGTCCTTTAGTGGAGCGTTTTCACTCAAAATTTTTAACTTCACACCCTTTAGGAACATCACATTATTCACAACATTAGAA
CAAAAAATACAAGAATTTCCATGTCATAATACGTCCCAAAACATATATTACATCCCTGCAACACATTGCACACATACATCAACATTTCAGATGATTTCGA
ACAAGATAATCATTATTCACACAATTTTGAACATGAATACTTAAACATATAAATCAACAAAAACATTTCATCCCTACTTTGTACAACCAAACATACCCAA
CCTAAAGTTCAATGGCAGCTAGTTACAAGGACATGCAAGGGGAAAAAATCCTATTTTGCTGAATGAATATCTTGAATCTTAGAGGGTCTATTAAAAAATG
AACAAAGAGGAAAGAAACCCATACCTTTATTTATGTTCAAGCGATGAATTTCCTTCCATAAACCCTTTCCAAAATCAGTTTAAGCTACCTTAATGTCCAC
ACCACTGAACGAACAACTTCTCTTTGCGTTAGCGTTTTTGGTTGCTTTGTTTTTCTTAAAATTTCAAGTGAGTTCATCAAGTGTGAAGACTCTTAATATT
ACTGCTGTTCTTTTTTGTTGTTGGCAGAAAAAATGTGAGCA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.931767
Expected error %
0.601651
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0243L18
Clone
Clone name
hba-243l18
LE_HBa0243L18
C12HBa0243L18
P243L18
Clone type
BAC
Contamination
none
Estimated length
94,587
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found