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Clone Read LE_HBa0243H06_T7_378191

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0243H06_T7_378191
Primer
T7
ID from Seq. Facility
LE_HBa_243_H06-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
100 trimmed for vector and quality, 959 raw
Sequence
>LE_HBa0243H06_T7_378191 (raw untrimmed)
TAGAGTCGACTGCAGGCATGCAAGCTTGACAAAGACCTTTGTGATCCCCTTTTAAGCCGCACCGAAGATCAAATGGAAAAGTAGAGCGACCCTTTTGGGG
ACCACATGTATTTGTTCCTTTTTGTGAATGTGAACGTTGCATCTGATTCCGGATCTTTAAGTGATCCATCATTGCTTGTGAAAATGGAATTATTCTTTGA
GTGATGAAATTTACATACTTTTATTAAGCTTGAACATGCATAAGTAGCTAGTGTTTTGAGCACAATAATCTTTTGTAATGGTATGTCACTACTTGAATAT
TCGAGTATACAATTGAGCGATGCATGACTAATTCAGGTCTTTTTAGGTATGTTAATGATTGAGTCATGTGTACTACAATTTGAGACATCTTATTTGAACT
TCTGAACATGAATTTCACTGGAGGATAAGCAAATTTTTATGTTTTGGGTATTGATGAGTCCTCAAATTGGACTAATTTAGGTTTTTTCTTTATTGTGAGG
AGCGTCCTTAGATGATCATTCAATCTCGGTAGCAGATGAAAACTCTTGATATATAACTAACTGGATTTTTTGTGCAAGTATGGACGCTTTCTTGCAAAAC
GTATTAAAATAATATGTAAGTAAAGACTGTACTTTCCAATTTTATACTATGCTATCCTGCTGAAGTACTGAATTTTTCCCTAATTACAACATTGCGAAAA
CCAGAATATATTGGTATCTATTATTGATGTTAATTAATTCCAGGGGGTGTTCCAAACACTTTTACTATGCAAAAATTTTCTTCCCTATGTTTCAAATTGT
TTAGTATTTTATTATCAATAATCATTTATCTTTATTTATAATGAATGTAGAATTCTTAGAATGACTCATCCATTTTAGAATTTGTTTTTCCAAAAGAAAT
TAACAATTACGATTATTAGATGTTCTTCATAATATTTATTTGTAATTTTGATTGATCTG
>LE_HBa0243H06_T7_378191 (trimmed for quality and cloning vector)
AATGGTATGTCACTACTTGAATATTCGAGTATACAATTGAGCGATGCATGACTAATTCAGGTCTTTTTAGGTATGTTAATGATTGAGTCATGTGTACTAC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.879481
Expected error %
2.24001
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0243H06
Clone
Clone name
hba-243h6
LE_HBa0243H06
C04HBa0243H06
P243H06
Clone type
BAC
Contamination
none
Estimated length
98,771
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found