Clone Read LE_HBa0224I13_T7_377101

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0224I13_T7_377101
Primer
T7
ID from Seq. Facility
LE_HBa_224_I13-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
39 trimmed for vector and quality, 1064 raw
Sequence
>LE_HBa0224I13_T7_377101 (raw untrimmed)
ACTCTAGAGTCGACCTGCAGGCATGCAAGACTTGATAACTCACGTTTCCCTCTCCATTTAGAGAGNGCTNNNNNNGCAAAACGAANGAANCCCCCCCTCT
CCCTATTAGAGGCAGACNGGGAAAGGTTTGTAAGGGACAATCGATCGCACATGGTCCGGCATCCGGCAAGGTAACTATTTTTTTACCCCTTTTATATGCA
ATACCCAACCGTAGGAGATAAGTTAAAATGAGTCTATTTTATCTTATCTCTAACGAATGAATACAGCAGCGACGATGATTGTAAATAAGGTCAATCATCT
GATAAAATTTAGAATTTACTCTCCCCCCTTTTTTCAAAGGTAATGGAAAAATTGTTCTCGCCATAGATAAGACTCTAAATGTGCCTCTATTAAGGGATCA
TAGGAATGGCAATATAAAAATAAGGTAATGAAGGATAGGACGTGGTAAAAACTTAGTTATTGCAAAATATTTAGACGACCAAGATAACTAATAAAATATG
AGAAAGAAAAAAAACAATTATGGGTTTTGAGACAACTTCAAAGAAATATAAAAAGTCCAAAACGACTAAGATTAAAGATATCTGAGATAGAAAACGAGAT
TAAATATAAGTATTTCATCACTTAACACTAATACATTTATAAAAAAATAGTAATAAAAACAATAGATACAATAAATGACCTTAATTGGAAAGAAGCTATA
TATATGGAAGTATAACAAAATATAAACTGATAAAATCAATACAAAGATAAAAAATTATTTTAAATGAACAAAAAATTAAAAAAACACACAATAAAGTACA
GAATAATTAAAAAAAAAATGATAATATTATATATAATTACAAATAAAAAACATAAGATAGAACTTATAAATAATAAAACAAGGCTACAAACACTATTATA
AACACAAAAATAAAATTAAAAAATATAAATAATAAAAGAATAAAAATAGTCAAGAAATAGATTCATGACAAAAACCGTTAAAAAACATGAGATCTCATAT
TCCGAATAACCGTAACACAATTAAAATAGATAAATCAATAATAATAATAATAGACTAATATAAA
>LE_HBa0224I13_T7_377101 (trimmed for quality and cloning vector)
CTCTAGAGTCGACCTGCAGGCATGCAAGACTTGATAACT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.83159
Expected error %
2.80938
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0224I13
Clone
Clone name
hba-224i13
LE_HBa0224I13
P224I13
Clone type
BAC
Contamination
none
Estimated length
97,962
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found