Clone Read LE_HBa0113G20_SP6_37574

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0113G20_SP6_37574
Primer
SP6
ID from Seq. Facility
LE_HBa_113_G20-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
21 trimmed for vector and quality, 1373 raw
Sequence
>LE_HBa0113G20_SP6_37574 (raw untrimmed)
GTTAGGAGTTCGACTCCCTTGCGTTGTTGTGCATATTTCTGGTCGTCCGTCTTTTGTGTACCACGCAGATACATAGTGAGTGCTCCAGTCAGCATATGCG
CACTTGACTAACAGTAAGGAATATGGGTATCATGTATAGTTTGTATCTGCACTAATGTGTTTGCTTTTATACAATTAGTAGGTGGATAATTTAGCGATGG
AATGTTGTGGTCGTATTGTCAATATAGTAGACGTCTCATTACTTTGCATGTAGCGGTCATATGTAGTATTGTTTGTCTCAATATATTTAGTGTGATTTAT
TATAATGATTATTCTATTCATTTGTTCTACATTATTGTGCTTGATTGTGTATCTTCTGCTGCTCGTTCTCACTCCATAGTGATATGCATGTATGTTTTTG
TTGTCTCCTCTCTTTTCTTGCTTCTATTTTTATTTTTTCTTGTATTTGTTTTCTTTTGTTGTTACTGTGTATGTATCTACTATAATATGTTGCTCCTGCT
GAATTTTACTCTTTTCATTTTTTATCTCTGTTTTTTCTTTTTTTTATATTTTTTTTTTATTTTCTTTTTGTTTTTTTTTTTGTTTTTTTTTCCTATGCCT
ATTCCACTGTGTGTACCCTCGAAATGGTTGTCATTGCTTCTATTATATAATATTTTATTTTATTTGTTGTTTCTCCACTTGCTTTCTCTTGTCTTTGTCT
ATATTCTCACTTAACCTGATTCTTTCTCACTTATGTGTTCACTTTTCCTTATTTTATGTGAAGTACTGTTATCTGACTGTTAATGTGTGTACTATCCAAT
CCCTCGACTTTCTTTTTTTTTTTATTTTTTTTTTTTCGTTATGCCTTAGCTTCTTATTTGTCTTATATTTTTATACTTTATCCTTCTCTGTTTCTTCTTC
TTGTTTTCCCCGCCTTTCTCTCCGATGATCCCACCACTACTCTCTCTCTGCTCTCTATTTGCTTCTTCTTTGTAGCTTTTTGCGGNTACTCCGATGCCGC
TTCTTATGCTCCGGNGTACACTATATATTAGCTTTCTATTGACTTATATGATGTAAGGGACTTGTGTAGTCATGTGTTGCTCTATGCTAATCTACTGATC
CTTTGATATTACATGATCGCATCACTACTACTCTGCCACACCGTATGTTATAGAACCATTTGCGGTTCATGTCGTCGTCGTTATTGTACGTTGGTGTTAT
CTATCTTAGTGCATATATATTACGATATGCAACACGCTTCGGCCTGTATGACCACTGATACTTTGACACTATCTTTAACTTACTGTTGCCTTTCTTGCCG
ACTGCTCTCCTCCTCTACGCTGTATTCACTCCTCGTATCTCTCTGCTTCAACTCCTACTCGGTTTTCATTGCC
>LE_HBa0113G20_SP6_37574 (trimmed for quality and cloning vector)
TTTTTTTTTATTTTTTTTTTT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.1485
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0113G20
Clone
Clone name
hba-113g20
LE_HBa0113G20
P113G20
Clone type
BAC
Contamination
none
Estimated length
72,881
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found