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Clone Read LE_HBa0214K18_T7_375287

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0214K18_T7_375287
Primer
T7
ID from Seq. Facility
LE_HBa_214_K18-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
4 trimmed for vector and quality, 1369 raw
Sequence
>LE_HBa0214K18_T7_375287 (raw untrimmed)
GTTCGACTCTGTCAGCGCATTGCTAACGCCTTGTTCAACTTTAAATTTACTTGGTTCCTTGAGATCAGAATATATTGATTTGCTTACTCGTCTGTTTGGA
TACACGCGTAGTCAGAGGAGCGGTTGTCGCCCAATCATATCATGGGGTGACTCGTGTAACTCTCCCAGCAAAGATATGATTCGTCTGAATAACTTTTCCG
TCTATATGTGTGTAAGAATAGTCTATTGCTAATCATTCCCATCTGTTAGAGTGTGCTGCATATAATGATTCCTATGCGTCTCTCTCCAGAGATGACCAAC
ATATCAGCTATCGTCATCAACTTCTTGTATCTGACTTTCCATTGACATACTTAGTCTCTTGTTAGAGTATGTCAACTCCCATTTTATAGAACCTGTTACC
GTCTATCTAATCTACGCTCTACGTAGTCTTAAGAGTACTAACTTAGCGATTTACGCTCATTTTCTCTGACTCTTCTTCATCTTTTGGTAGGCACTATAAC
ACAACTCCGTGCCTCCTCGTACATTCTACTTTAAGTTTTCTTTCCTTATATTGTAGTAGTTCTTTATTACGATTATACTGTGTAATACTGTCTCTGTGCA
TACATTCTCTACATATTGTCTCTATATCGATATCATTTTAGTTGCTATCTTAACTTCGGTATGTACATCTCAAAAGTGTCTCTGATCTGCTACACCTTAT
ACTACTAATCCTATCTCGCTTGCACATATTATCCTACTTCTTCCTAACTTAACTATATTTTCTCCCTATCATGTGTTCGTATAGAAGTAAGTAATCTCGC
ATTCTTCCTCTACTAGACTTCTTATTATATGATTTCCTTCTACTCATTGAGTCTTATTATATACTGTCGGCATCAATTTTCTCCTCCTTCGTTAATATGT
GTTTGATTCTATAACTATTCATACTTTTGTCGTCACTTTCCTTATAATTATTTCCTTTACTCACTTACCTAGAATATCTCATCTCTTATATTAAACTCTG
ATTACATCTTTCCCTGTTATCGCATGACTTTCAACCTCTACATTTACATTCTTGTTCGCTGATTATACATACCATGTCTTATAATATATCTATATTATCT
TTCACATGTTACATTTATCTTATCTTACTCCGTCATATATCCACACTTTATTTTATATTCATCTTTTTCTCGTTATTAATGTGTGGCTACTCTTAGTTAC
TATACCTATCTGTCATATGTCTCNCCTTCTTTAATTTCTCTATGTCGCGTAGTATACCTTTTCTGCTTCTATAATCGCATCTTAATAGTAAATTTAGTGT
ATAGATGATTCTATTACCTAGGCATTTACTTTATCTTCTCTCTATATTCCTCTTGTGACATCTTGCTTC
>LE_HBa0214K18_T7_375287 (trimmed for quality and cloning vector)
TTGC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for contaminants
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.48251
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0214K18
Clone
Clone name
hba-214k18
LE_HBa0214K18
P214K18
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found