Clone Read LE_HBa0113B23_T7_37341

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0113B23_T7_37341
Primer
T7
ID from Seq. Facility
LE_HBa_113_B23-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
229 trimmed for vector and quality, 816 raw
Genbank Accession
DU085750
Sequence
>LE_HBa0113B23_T7_37341 (raw untrimmed)
TGACTAACATGATTTTATTCCTGACTGGTGTATCTCTAAAGTCAACTGCAGGCATGCAAGCTTCCAAATTTTGAAAGATATGTCCCATTACCTCCTCTCT
GGTATTGACTCTATTAGAGGGGACCCCCTGTTTTGTGGTATATTGTGATGCATTCCGAGTGGCTTTTTGGTGTGTTTTTATGCAACATGGGAAAGTAGTA
GCCTATGCCTCTAGATAACTCAAGGTACATTCAAAGAATTATCCAACTCATGCTCTTGAATTAGCCATCGTAGTGTTTGTTATAATAATATGGAGGAATT
ACGCACATTGTGTTCATATGGATGTGTATACCGACCATAAGAGTCTTCAATATGTTTACTCAAAAGGCGTTAAATCTCCGGCAAACAAGATGGTTGGAAT
TGTTGAAATATTACGACATATGTTTTTTTTTCTACTCTATAAAGGTCAATGTCGTTGAGGATGTCTTAAGTTGTATGACTCATGGTAAACATGTCTCATT
GTGTAAGATGGTGATCAAGATCTATTTATAGATGTCCATATGTTTTGCTAGATTGAGTTGTTTGTTTGGATATATTTTCTATTGGTGTGGTTTTTATTGG
TATTTTCATTTAATTTCAGACTTCTATCTTTATTTAATCTTATTTTAAATTTTTTTTTATATTTCCTTTTTTTTTTTTTAAATTTTGTTATGTTTTAAAT
TAGACTTTTTATTTTTTTATATGTTTTTTTTAAATTTTTTTATTTTCTTTATTTTTGTTTTGTAATATTTTTGTTTTTTTATATGTTATTTTTTTTCTTT
TTATTTTTATTGTCAT
>LE_HBa0113B23_T7_37341 (trimmed for quality and cloning vector)
TCCAAATTTTGAAAGATATGTCCCATTACCTCCTCTCTGGTATTGACTCTATTAGAGGGGACCCCCTGTTTTGTGGTATATTGTGATGCATTCCGAGTGG
CTTTTTGGTGTGTTTTTATGCAACATGGGAAAGTAGTAGCCTATGCCTCTAGATAACTCAAGGTACATTCAAAGAATTATCCAACTCATGCTCTTGAATT
AGCCATCGTAGTGTTTGTTATAATAATAT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.948539
Expected error %
2.25127
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38724.1| Score 89 E Value 4e-17 Identity 23.50% Align. Length 182bp (79.48%) Frame 2
putative retrotransposon protein [Solanum demissum]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAT38744.1| Score 89 E Value 4e-17 Identity 23.50% Align. Length 182bp (79.48%) Frame 2
putative gag-pol polyprotein [Solanum demissum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0113B23
Clone
Clone name
hba-113b23
LE_HBa0113B23
P113B23
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found