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Clone Read LE_HBa0203H10_T7_368215

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0203H10_T7_368215
Primer
T7
ID from Seq. Facility
LE_HBa_203_H10-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
15 trimmed for vector and quality, 823 raw
Sequence
>LE_HBa0203H10_T7_368215 (raw untrimmed)
TCAATAACCAGCAGGAAGCCAGCCTTCTACAAAAACTGAAGACCTCGCCCTCTTTTTAGGGAAACGATCCCCAGAACGAGAAAGGGAACCCTTTTTTTAA
GGGGCGCAAAACCTCCAATACGTGTAAGAAGTGTAATGGTACTGCAACAGACTATCATTGTATGGATATTCCCATCGTAGATCAGGGGGCGCCACCGTAA
TTATCCGACGCAT
AATTAAAATTCATCTGAGATAGAGATGGTTAGAAATTCAAGGATGACACTACATAGATGGGGAGATGATGAGAATGATACATGTATC
ATCCGTGCCTACAAGAAGGACTTACTCTAAAAGATTTTAATTTGAGACACCGGAGATGGATGGAACTACTGAACGACTAACGCATTCATGAATCATCCAG
GGAAGGCCAAAGTTGATGCATATGTCTAATGATGACGAGGAGGGAGCATGAAAAAGTCAAGCCTATCTGCAGATGTCTAGACTTTCAATGATAAGATATA
TTCTCATTCATGCTAAGGGATTAATCATGATTAAATAAAATGATATGTGAGGATTGTTGGTCTTTGTTGAGTCTTAATCAACTATTCTTGATCGTATAAC
ATAAGTTAATAGAATGATGACAAATTTGTTTGAATCCAAGTTAAAGTGTTACTATGAAATGTTAATTAATACATATTCATAAAGATTAGGTATTTTGATA
TTAGTTTTGATAGTAAGTCAAACCTGTGTTTATCTTAGGTAAAAATTTCTTCTATAAGAAGTTTATATCTTTAGAATTCTTTATTCTTTATTTTATCCAA
TTTTTTTTGAATCATTAAGATTA
>LE_HBa0203H10_T7_368215 (trimmed for quality and cloning vector)
AATTAAAATTCATCT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
  • Not screened for contaminants
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.436947
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0203H10
Clone
Clone name
hba-203h10
LE_HBa0203H10
C03HBa0203H10
P203H10
Clone type
BAC
Contamination
none
Estimated length
127,722
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found