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Clone Read LE_HBa0203H10_SP6_368214

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0203H10_SP6_368214
Primer
SP6
ID from Seq. Facility
LE_HBa_203_H10-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 954 raw
Sequence
>LE_HBa0203H10_SP6_368214 (raw untrimmed)
CGTGCCCGTACGAGGGAGTCAAGGCGAAGGAGGGGGAGGATTATAAGCGAACCTTTATGGGGGAAANGNNGGAAGAAGGGAAAGAGGAAGACCTTTTTAG
GGCCAAGGAGAAATTGGAAGACACGCGGACGGCGAAGAGAGAACAACACAGATCGCGCAACAAGGCCACCGAAAAGGACAAGAGGTTCCACTATTCATGC
TAATACTGTACCGCCTTGAGGTGTAACAATATATTCCGAAACTCCTATTGAAAATCGCAATATCCATATGTAAGCGGATAACAAGGAAACATCTGTTGCC
AAAGAAAGCATCGAAGGACACGCTTAGGATACAATAGATCAATACAGGAAACGTTCGTAGGGATATGAGAGTATCGTTCTTCAGGACAAGTCGATATAAC
AGGATAAGGCAAAAGGGACGGAAAAAATGAAGACCGAATGAAAGCAAACATATAGAAGGCTGTGTTAGAGGGCAGAACATGAAATGACAAGTTTCAGTTT
TCAGAAACGCGCACGACTAACAAGAGACAGTGAGAAGTCTATCCACGACGTCAGAGGATTTTAGGACGAAATACGTGTAAAAGGCTATTACTAAGAAGTG
TACGAATGTAGAGGAAAATTCAAGAAAAATAAGCACCAAAATCAAGACATTGAAGTGAAAATATCTATGAAGAAAAGGCGGGAGATTTTTCAAGACTTCA
ACCCTCAATGTATTACGCAGAGGGAAACAGTAGATCGAAATATGGGATGAACGCAACCAACTCCATTAGGATCCACCTTTTAGCGAGACGTCACATAATT
CAACTTAATTGATCACTAACTCATGAAAAACGCTAAGGGGCATAGAAGAAAATAATTTCGTGAACGTGCCCAAATATAATTTACGAAAAAACGGTGTTAC
CTAAATGGGGACAAACTCTTAACACCCATGAAGGTACCAATATGCCTATAAACA
>LE_HBa0203H10_SP6_368214 (trimmed for quality and cloning vector)
CAA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
  • Not screened for contaminants
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.682791
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0203H10
Clone
Clone name
hba-203h10
LE_HBa0203H10
C03HBa0203H10
P203H10
Clone type
BAC
Contamination
none
Estimated length
127,722
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found