Clone Read LE_HBa0111M10_T7_36307

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0111M10_T7_36307
Primer
T7
ID from Seq. Facility
LE_HBa_111_M10-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1176 raw
Sequence
>LE_HBa0111M10_T7_36307 (raw untrimmed)
CAGTCTGTACTACCACTGCCAGCCGCGTAGTGCAATCTTTCTCTCATCGCTCACCTCGGCTCCGCTGCGCCGACCCCCTGCGATCACACCTGAATACGCA
TACCACCCCTTTTCCGGCGATCCACCAACGTGCGTCGAAACCTGTATGACACTTTGGCGGCCTCTCCCGCCTCACAATCGTGCTCTCTTCTCATCTCTAC
TGGGGTGCTACGTATAGTCGCTGGGCACTGCAACATACACGGCACCCAGCCAAAGGACTGAGGCGAGAAGTGGAGAGGAGGGGGCGCACCTATATTAAAT
ATCTGAATGTGCGGACCGGCGCCCCCTGTATACCCGGGTACATTGTTCTTTCGCTACTCACATACATGACCCTCGGCTCGCCTTCGCGACTCCCGCCTCG
AGCTGGGGACATGTCTATGCGTACATAAAGCAAATCTACATGACGCTATGTAGAGTTCCACGTACCAATAATGTGTGTTGCAGTTTTTTGGCATCGGTGT
GGATTTACAAGGGGACAACGGAGTCGATATCATGNGATCGCTCGCTGTAACGGAGCGATGAGGAAGTCGAGGTTGGATAGATGTGGAGACAGAACCGGTA
GGTCATCCCGATCGACTTAGCATCTGATCGGCCTGCCTCAACTCGTTATCACTTATTACCGCCACTTCTGACCAAGCCTCTCATCTCTGATCCTCTTCAT
GTTCGAGCCGGCCTGTGAACCGCCGCGCAGCCATCCTGCGGGGCGTCGACGTGTTAGTGGGCAACTGTGCAGCGCTAGCCTGCAATGTCGAGTGCTGCGG
TGCTCTGCCGTTATTGCAGGTGTGAGTGTTTACGGGTCTGTGTCGTCCCGTGTCACCGGTTTCGACGTACGACGTACGCTTCCACCTTAGCCACAATTCG
GCCGGTGCGAGACTAGTGATGCGACTCCCTTTACTCGCGTCCATGAAGTGTCGTCGGACGTACATGGGTCCAGGAGCTGTGNATCGACTGGTTGCTCTCC
ACTTTTGTCTGACGTGCTCCGTTCATTGTTCCCTTGCTATAGTGACTCGTACTCGTATCGCGTGATCAGTCTGTGCCGGCAACTCTCATACATAGTACGT
GACGTCGGGTGCGTACTCGTCTTGTATGATGTACACCCCGACTTGTGACGTAATCTCGATATGCACCCTGCGCTAC
>LE_HBa0111M10_T7_36307 (trimmed for quality and cloning vector)
TG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.18961
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0111M10
Clone
Clone name
hba-111m10
LE_HBa0111M10
C02HBa0111M10
P111M10
Clone type
BAC
Contamination
none
Estimated length
138,131
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found