Clone Read LE_HBa0106N20_SP6_34838

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0106N20_SP6_34838
Primer
SP6
ID from Seq. Facility
LE_HBa_106_N20-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
449 trimmed for vector and quality, 707 raw
Sequence
>LE_HBa0106N20_SP6_34838 (raw untrimmed)
TTATCCATATAACGACAACATAATTCTCGTTTTCCAAGGATGCGTCCGATGTGGGGAGCCAAAATGGCTTGTGTGTTGTAATCAATGAACCTGAGGTACT
GGTGCTAGTATTGAAGATATTGAGTGCTTGATCTTGATCAAATATTGAGATAGGTGAGAACATGGTTGATCATCTCTGGAATAAGTTAGGCTGGTGATTT
CTTCTCATGAATCCGCTTATCATCCACCTTATCACCCTCTCTTGTTACCTCATTGCCCAGCGGAGGGGTCGCTGCTCTATCCATGCTGGCCCAGCTGCCT
AACCTTTGTCGTTGGTAGGCTTTTTCTCCTATGATCTATACCACAATGTGTCATCACTACTCCCCATCGGGCTAATGCCCCAACTATTGACTCAGGTGCA
TCCTCTTTTGTTGGTGTTAGTATTGACACTATTGTTGCTCTAGTTCTAACCATGTGGAAAATAAAGTGAATAAGGTTATTACCAATTTATATCGCCTATC
TACCAATTTGATTTGACTAATAGCATTATAGAAAGAAGGATTGTGTTCTCTACAACCTAGAAGTATCCACCACCTATGTACATGTATTTCCAAAACTTGA
AACTCATCATACTTCATCTATATCCTAGAAATGAGCACACCATTTTTAGGAGGAAAATTAAATACCTTCTATCTAGTCACCCCTTGCTTTGTGAAATTTA
ATCACTT
>LE_HBa0106N20_SP6_34838 (trimmed for quality and cloning vector)
GGAGCCAAAATGGCTTGTGTGTTGTAATCAATGAACCTGAGGTACTGGTGCTAGTATTGAAGATATTGAGTGCTTGATCTTGATCAAATATTGAGATAGG
TGAGAACATGGTTGATCATCTCTGGAATAAGTTAGGCTGGTGATTTCTTCTCATGAATCCGCTTATCATCCACCTTATCACCCTCTCTTGTTACCTCATT
GCCCAGCGGAGGGGTCGCTGCTCTATCCATGCTGGCCCAGCTGCCTAACCTTTGTCGTTGGTAGGCTTTTTCTCCTATGATCTATACCACAATGTGTCAT
CACTACTCCCCATCGGGCTAATGCCCCAACTATTGACTCAGGTGCATCCTCTTTTGTTGGTGTTAGTATTGACACTATTGTTGCTCTAGTTCTAACCATG
TGGAAAATAAAGTGAATAAGGTTATTACCAATTTATATCGCCTATCTAC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.963249
Expected error %
0.302778
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0106N20
Clone
Clone name
hba-106n20
LE_HBa0106N20
P106N20
Clone type
BAC
Contamination
none
Estimated length
100,787
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found