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Clone Read LE_HBa0104O23_SP6_34124

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0104O23_SP6_34124
Primer
SP6
ID from Seq. Facility
LE_HBa_104_O23-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
740 trimmed for vector and quality, 832 raw
Genbank Accession
DU089333
Sequence
>LE_HBa0104O23_SP6_34124 (raw untrimmed)
GGGGCCGGCTTTGTTATCCACACTTTGGTCAGAATTCCCCATCTTCCTTCAGCAGCTGCACTACGCTGCCACCTACGGCACTTTCATAAGCTCCGTAGGT
GGTCTCTTCTGCATTTCTTCCCTCAAAATCTCCGCATTCAGCTTTGGAAAGATTTCCTGCAAAACAAAGAGAAACTTATATAAAAATTAGAACAAAAAGG
CTTTTGGACACACTAAAATTAAGGAAAAAGTATTAATAATACCGTGAAACCACAGTATATCAACACCCTCAACTTAAATTCGTTGTTTGTCCTCAAGCGA
CGCACTATGACTCACTACACAATCTTTGTACAATAGTATCCATGTTTTTATCCTTTGCAATCATTTGGCTATCAATCCCGATTAATCTCATCAAATCTAT
GCATGCTATCACTATTATGCTTGAATTTTGTGGGATCAGAACATGACACAGACTCACCATGCACTAACACCTATCCTCTTTAATTTCTCATTGAGGTGCT
AATAATTCTTGTATTGCAACTAGTGTCGTCACTTTAAAGCAAAATCCTTCTTTTTCACACAATGATTTCAGTTTGAGTATAAGGATTACTTTTCAACACT
CACTCTCAGAAAAAAGTCACACTCATTCATACCTTTTGCCATAAGCTTGCCCTTATTTTCACTGCCTTAAGTTCGCTATACAACCCTTAGGATCACGATA
GGACTTTTTTAGCTAGTAACATAGGTTCGGGGTCAGGTAAGGTATATTTTGGTATACTTTAGTGACTTTTTTTTTGCCTCCTTTTACTATCGGCTAAACC
TTCCACTATCTCTCATTTTATCTCGCCCAGTT
>LE_HBa0104O23_SP6_34124 (trimmed for quality and cloning vector)
TTCCCCATCTTCCTTCAGCAGCTGCACTACGCTGCCACCTACGGCACTTTCATAAGCTCCGTAGGTGGTCTCTTCTGCATTTCTTCCCTCAAAATCTCCG
CATTCAGCTTTGGAAAGATTTCCTGCAAAACAAAGAGAAACTTATATAAAAATTAGAACAAAAAGGCTTTTGGACACACTAAAATTAAGGAAAAAGTATT
AATAATACCGTGAAACCACAGTATATCAACACCCTCAACTTAAATTCGTTGTTTGTCCTCAAGCGACGCACTATGACTCACTACACAATCTTTGTACAAT
AGTATCCATGTTTTTATCCTTTGCAATCATTTGGCTATCAATCCCGATTAATCTCATCAAATCTATGCATGCTATCACTATTATGCTTGAATTTTGTGGG
ATCAGAACATGACACAGACTCACCATGCACTAACACCTATCCTCTTTAATTTCTCATTGAGGTGCTAATAATTCTTGTATTGCAACTAGTGTCGTCACTT
TAAAGCAAAATCCTTCTTTTTCACACAATGATTTCAGTTTGAGTATAAGGATTACTTTTCAACACTCACTCTCAGAAAAAAGTCACACTCATTCATACCT
TTTGCCATAAGCTTGCCCTTATTTTCACTGCCTTAAGTTCGCTATACAACCCTTAGGATCACGATAGGACTTTTTTAGCTAGTAACATAGGTTCGGGGTC
AGGTAAGGTATATTTTGGTATACTTTAGTGACTTTTTTTT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.957754
Expected error %
0.226112
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0104O23
Clone
Clone name
hba-104o23
LE_HBa0104O23
C12HBa0104O23
P104O23
Clone type
BAC
Contamination
none
Estimated length
126,541
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found