Clone Read LE_HBa0116D01_SP6_300055

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0116D01_SP6_300055
Primer
SP6
ID from Seq. Facility
LE_HBa_116_D01-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
257 trimmed for vector and quality, 873 raw
Sequence
>LE_HBa0116D01_SP6_300055 (raw untrimmed)
ATCGAATTAAGAACAAAAGATGGCAATAATAACCCACTAATTAACTTAAGGTTACCTCTTTTAACCCCCAAGTAATTAAACTTATTAAAATTAACCCACT
AAATTTATAATTAAAGCAGGAATAGTCCAAAACGCCCCTTAAAATAATTACAAAAATCCGACCCAGCCTGGGATAACGCAGCCTGTGACGGCCCGTTGCC
CCTGCGACGGTCCGTCCTGCTGCTCCGTCACATAGTTCAGAGACTCAATTTCTCTGATGAGTCTGTGACGGTGCGTCTCGCCTATGACGGTCCTGTCCCT
TATACTGTTACGTAGTTAACAGAGTCCATTTTATCACTCCTGTTTTTCTGAATTCTGCGCGACTATGGACCGTCTACTCTGCTACCTGTCCCTTTATTCC
CTCTGCTGCCCTTTTTTCTATAATCGATTAATTTATTATTTCTATTTGTTTATACATTATTACTCTCTGCTTGTTCACCTCTATCTTTACATTTTTCACC
TTCTATATTGTACTATCTCCCTAATGTTTATTCTATATTAATTATCTCTCCATCTTGGTTCCGCTTTGGTCTTTCCTCTAAGCTTGCTACTATGCTGTCA
TATGCTATTATGTTATATTATAACCCTCTACTTATTTTTATTTATCATATACTCAATTTTCATCACTTTATACTATTTCCACTTATAGTTCCTCTCCTCC
TTCGGATATTACATACGTTCTTCTTTTGATCTTCATATCATTTTTTATATCTCGTCATTAAATTATTCTTCGATATACTATCTATCTTTTATTTAACATA
TTTAATTTAACTTTTATTAGTTATCTTTCTACTATATCTTCTTCTCGTTCCTATTAATCCTCGATACTTAAAG
>LE_HBa0116D01_SP6_300055 (trimmed for quality and cloning vector)
AACAAAAGATGGCAATAATAACCCACTAATTAACTTAAGGTTACCTCTTTTAACCCCCAAGTAATTAAACTTATTAAAATTAACCCACTAAATTTATAAT
TAAAGCAGGAATAGTCCAAAACGCCCCTTAAAATAATTACAAAAATCCGACCCAGCCTGGGATAACGCAGCCTGTGACGGCCCGTTGCCCCTGCGACGGT
CCGTCCTGCTGCTCCGTCACATAGTTCAGAGACTCAATTTCTCTGATGAGTCTGTGA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.961147
Expected error %
0.15041
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0116D01
Clone
Clone name
hba-116d1
LE_HBa0116D01
P116D01
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found