Clone Read LE_HBa0116D01_T7_253212

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0116D01_T7_253212
Primer
T7
ID from Seq. Facility
LE_HBa_116_D01-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
529 trimmed for vector and quality, 970 raw
Sequence
>LE_HBa0116D01_T7_253212 (raw untrimmed)
ATGGTCGGGGATCTCTGAGTGACCTGCAGGCATGCAAGCTTTCATAGAGAGATTCTCCCCACCCACCCTCAAATATGGTTAAACATCAAACCCAAATCCG
AAATTTTTAAATAATTGGTGGTGAACCAGTACACAGACTTGGAAGCGGTTCAAGAAATTACTCTTCCAATGTCAAACACATGGCGCGCCGGACAATTTTC
TGTTGAAATACTTCTATTATAGACTTGATTAAGTCAATTAAGATTTGTCTCAATAGTTTTTCCAAAGAGGATTAATCCGACAACTGTATGAAGTAGTAAT
GTTGTTTCAAGATAACCTGACCAAGGTAAACCGAGCATGATATACTAGAGAAGACCAATTTTCTATTCTAAAAATAAGCATGACCAAAGAACACATCAAA
AAGGAAAATGACCAATATCACATGGCGAATATGATGACCTAAATTTATTTGTAGTCCAAACATGTCATGGGTTGAGGACTTAAATCTATAAATGCGGTTG
GAACAAGATTTCAATAGTGCCCAAATTATTGCAAACTTTAAGGCATTATACAATGAATAAGTTGAAAACTTAGGAAACCAAATGGGAGGTTCTAACAGAA
ATTATCCAACCACAAAATGGGAATTACGGGTTGGAACAAGGTCCTTATACAATACCTAGCAAAGTTTTATAGCTTCAAATAGCAATTTAGGTAACTTCCA
AGAACATGCTCATCCCTGAATGGTTCCTCTTATGTATATCTTAAATTTCGACTTTTTTCTTTCCTTTGAATACTTTTTTGTTTTGTATCTATGTTATAGA
ATTTCTCTGTTAACATACTTCCAATAATAAGAATTCCTCAATGTTTATACTTTTTTTCCCGTATAATATTGTCTAAATTTTTACGTGGTTGATTCTTCTG
ATATATATATCTTTTCGAAAATTTATCTTTCTCGATGTTGCTTCATCTCCTTTTGTCACTTTTTTATATA
>LE_HBa0116D01_T7_253212 (trimmed for quality and cloning vector)
CCTGCAGGCATGCAAGCTTTCATAGAGAGATTCTCCCCACCCACCCTCAAATATGGTTAAACATCAAACCCAAATCCGAAATTTTTAAATAATTGGTGGT
GAACCAGTACACAGACTTGGAAGCGGTTCAAGAAATTACTCTTCCAATGTCAAACACATGGCGCGCCGGACAATTTTCTGTTGAAATACTTCTATTATAG
ACTTGATTAAGTCAATTAAGATTTGTCTCAATAGTTTTTCCAAAGAGGATTAATCCGACAACTGTATGAAGTAGTAATGTTGTTTCAAGATAACCTGACC
AAGGTAAACCGAGCATGATATACTAGAGAAGACCAATTTTCTATTCTAAAAATAAGCATGACCAAAGAACACATCAAAAAGGAAAATGACCAATATCACA
TGGCGAATATGATGACCTAAATTTATTTGTAGTCCAAACATGTCATGGGTTGAGGACTTAAATCTATAAATGCGGTTGGAACAAGATTTCAATAGTGCCC
AAATTATTGCAAACTTTAAGGCATTATAC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.957477
Expected error %
0.224998
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0116D01
Clone
Clone name
hba-116d1
LE_HBa0116D01
P116D01
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found