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Clone Read LE_HBa0196C10_SP6_278843

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0196C10_SP6_278843
Primer
SP6
ID from Seq. Facility
LE_HBa_196_C10-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
350 trimmed for vector and quality, 1074 raw
Genbank Accession
DU095706
Sequence
>LE_HBa0196C10_SP6_278843 (raw untrimmed)
NNNAAGCATTTATAATCTTTTGTCAAAGTGTTATGGTAAGTTATAGTGCGTCGCTTGAGGACAAAAAAAGAATTTAAGTTGAGGGTGTTGATGTACCCTG
GTTTTATGGTACTTCCAATGCTTTTTCCTTAAGTTTAGTATGTGTCTAAGGCCTTTTTGTAGTGGTTTTAATGTGTTTTTCTCTGTATTTGCAGGAAAAC
TATCCAGAATAAAAATGCTAAAGATTGTGCTGATATCTGCAGAAGTGATGACCTACGGAGCCACGATGGTTCGTCGACCCTATGACGGTCTTTAGGTGAT
GATCGTTGAATAAAGGTCCAAGCAGAAGAAATCAAATCGAAGAAATTTGACTAAGTGTGGGTCTACGGAAGGAGAGACGGTTCTTATATTCTTTCAATCC
ATATTCTATTCTCATCCTTATCATGTACATAACTTATTTTTCTTGATTCTTTATTACATTAATCTCAGTATTTTACTTTTATCCACGATTTCATCTTTCT
TTTTTTATTAACCACTCATTCTTTTATTTAATAAAATTAACTTAAGTATATATTTTTATTATCTTACTTTCTATTATTTTCACTATCTACTGTTATTTTA
TCTCTTTTTATTAATTCACTATTTTTCGATTTCTTTCTATCTTATATTTAATGATTATTTCATCATTTTTTTTATTCTATTTCATTATTCTTTATCATCT
TTCATCGTATTATTTTATATTCATTCTCTTTATATTATCATTTTTATTTAACCTCTCTACTTCTTATTATTATCATCTCTTTCCCACCTTTTTTATTATA
TTCTTTTTTAATCCTAATAAATCTTATATTATATCTTCATATTGTAACAATCTACTTTTCATATCTTATTCAATTATTTTTATTTTATTTTTATAATCAA
CTTTTTTTAAATAATTACCTTCTTTTCTTTTATCTTTTTTTATATACTCATATATTACTTATCTCTCTATTATATCTTTCATTTTTCCATCTTTTCTCCT
CTCTCACACTCTTTCTTATATCTCATTCCTCGTTTTTTTTTATTCTATCCTTTGTTTCCTTCCTTCACTATTTC
>LE_HBa0196C10_SP6_278843 (trimmed for quality and cloning vector)
GTGTTATGGTAAGTTATAGTGCGTCGCTTGAGGACAAAAAAAGAATTTAAGTTGAGGGTGTTGATGTACCCTGGTTTTATGGTACTTCCAATGCTTTTTC
CTTAAGTTTAGTATGTGTCTAAGGCCTTTTTGTAGTGGTTTTAATGTGTTTTTCTCTGTATTTGCAGGAAAACTATCCAGAATAAAAATGCTAAAGATTG
TGCTGATATCTGCAGAAGTGATGACCTACGGAGCCACGATGGTTCGTCGACCCTATGACGGTCTTTAGGTGATGATCGTTGAATAAAGGTCCAAGCAGAA
GAAATCAAATCGAAGAAATTTGACTAAGTGTGGGTCTACGGAAGGAGAGA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.948928
Expected error %
0.036931
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0196C10
Clone
Clone name
hba-196c10
LE_HBa0196C10
P196C10
Clone type
BAC
Contamination
none
Estimated length
115,661
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found