Clone Read LE_HBa0183O23_SP6_277641

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0183O23_SP6_277641
Primer
SP6
ID from Seq. Facility
LE_HBa_183_O23-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
552 trimmed for vector and quality, 938 raw
Sequence
>LE_HBa0183O23_SP6_277641 (raw untrimmed)
NNNCCCTCGCCGCTCGCGAGTAGTTCATTGTTTCATGGCAGAAAGTGGTAGTTATCAATATAGGAACAAAAAACTGTCAAGAGTATGATAAGGACTCACT
CTCCAATCAAAATTTACTCATTGGTAGATATGAAAAAGTGGGTACATTTATGACGTAATCAAATTCCATTCTTGCCATATCATCACTAGAAATACTATAA
TAATCAAAATCTCAAAACAAAATATAGGTGCTTTAAAGGGGTCAAGAGTACCTTTCCAGAAGCTGCACTTTTTGCTTGGGTCTTTTTCCGTTAAGAACTT
GAAAGGAGTCACTCAAAACCTCCTCCAAGTTAGTTGTTTGGAGGAGCCTCACATCTCTTCGCACCTAATATCATCAAAACGAACATATAAACTAAGCATT
TGCACTTAGGACATAGAGCAAACCCCATCAATTCCCCCCCCCCCCCCCCAAAACCCAATGCAAATAATACATATGTGAAATAACCTTGGTAACAACCTTT
GAGGGGTATTGGAAATAGGAACATCTTCTATGACAGTTCTTTGTGTTTAAAACAAAGCAAAGCCCATTACAACAACAACAACAACAACTTACCCAGTAAT
GCCATAGGTACCCCTATGCATAGTATAGACCAAAACAAAGGTTCCGCTGCCTTCGACCCCTAACCAATTAACCAAAGTATAATCATTCTAGATCGAATCC
TATGAAATTGTGGAATTTCCTTTCAAATAAAAAGCCCTTTTGGCCATTTCAAGGGACGCCCTTGAGCTTGTATTAAAAAAATAATATCCCCCCTTCAAAA
AAAATTCCCCACTATTTCCTTAAAAAAAAAACTTCCCAAAACCTTCCCGCCCAAAAAGTTTTGCCATAACCCCTTTATCAAACCAGACCTTTAATCCCCT
TTTCTAAATTTTAGGGGGTAAAAAACCTTTTCCCAAAG
>LE_HBa0183O23_SP6_277641 (trimmed for quality and cloning vector)
ATTGTTTCATGGCAGAAAGTGGTAGTTATCAATATAGGAACAAAAAACTGTCAAGAGTATGATAAGGACTCACTCTCCAATCAAAATTTACTCATTGGTA
GATATGAAAAAGTGGGTACATTTATGACGTAATCAAATTCCATTCTTGCCATATCATCACTAGAAATACTATAATAATCAAAATCTCAAAACAAAATATA
GGTGCTTTAAAGGGGTCAAGAGTACCTTTCCAGAAGCTGCACTTTTTGCTTGGGTCTTTTTCCGTTAAGAACTTGAAAGGAGTCACTCAAAACCTCCTCC
AAGTTAGTTGTTTGGAGGAGCCTCACATCTCTTCGCACCTAATATCATCAAAACGAACATATAAACTAAGCATTTGCACTTAGGACATAGAGCAAACCCC
ATCAATTCCCCCCCCCCCCCCCCAAAACCCAATGCAAATAATACATATGTGAAATAACCTTGGTAACAACCTTTGAGGGGTATTGGAAATAGGAACATCT
TCTATGACAGTTCTTTGTGTTTAAAACAAAGCAAAGCCCATTACAACAACAA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.948237
Expected error %
0.0227661
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0183O23
Clone
Clone name
hba-183o23
LE_HBa0183O23
P183O23
Clone type
BAC
Contamination
none
Estimated length
87,394
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found