Clone Read LE_HBa0183O23_T7_125917

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0183O23_T7_125917
Primer
T7
ID from Seq. Facility
LE_HBa_183_O23-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1529 raw
Sequence
>LE_HBa0183O23_T7_125917 (raw untrimmed)
GTACTCCGCAATCCTCATCAGCCATCTCTAGCTCCACACCACGCAGGCTCCAGTGAGGGTCAACCNTCTCTAACACAGACGCGACCATTGACAGCGGGCG
ATTGCGCAAGACGTCTACGTCAGCAACTNCGAGGGAAGACAACTCGTTGCGACCCATCTATTAGGCGGCGCACANCGCCTACGCCCANTCGCCCAGAACC
ATCTCTTTCGGACATCTCCGAGCGAGCATCCTCTCTATTGCGGGCGCGNATCACCTAGNCCCAGTCNTAGACTACGACCTCCTATGACCCACTACTACGA
ACACTCAAGTCAGTCTACCCGAGCGCCGTACTCGTGCAGCAAGTAGTCAGTCGGCACGGATTATGTGATTCTATCTACAGCACGACTATGGAATACCACG
CTCTCTCGTGTCTACAACGTAGGCTAANTGATGCTCCNTTACGCTTGAGCCAATTATCTGTGCACATAACACGACAGTGCACACGGATCATATGGCGAGT
GATGAAATACAAGCATATATAGACCTCTTACTCCTGCAATACTCTCAAGTGCAAGCATATTACGAAAACAGATGACATCTATAGCAGAGCGCTGTCANAT
AGAGTTAGCCATGCCATCGCTAGCCGCCGTGATTANTATACCGCACGTCTTCACACCGCCGCACTCANTCATAGTGTCCGCACAGCTTACGCATTGTGTG
TTATCCATCTCAATGGTGTTGTAGCTATCTCTGTTCTCATGTACCTGTGCATACCACACTACTGCAAACTATGAACACGTGATCGACTACATGCTCTGCG
ATGTCTTGTAGATGGTGAGTTTTAGTGCGGCTCGAATTCCACAAGTCATCGTCTCCCCGCTCNTATANGAATTGATTATACTTTGTTACTCCACTATCAA
CTATCCTGTCTATGGTAAATTGCCAGCCGCCGATGCCGCAGCTACTGTTCGCTCCACTGCATCCTCATCATNGACCAGCAAGCCACTACCCACTCGACTG
GAAACTAGGCTAGTCAACTGGGACAGTGACTCGAGAAGTATANAAGAACAAGCCGAGGTAAACATTCAACACGCAAAGTACGTGAGCGCCACCGTCCGAC
CTACACTAACGCTTCGGCCGTTATTCGTGTCAAAACATATGAGCCTACTTAATCTGCTANCATAAGATTGGCGAGATACCCTCCGCTGGGCATGTAGTTC
CGATCATACTGACCCTCCCTACATGTGCCCCGCGCACCTTATCCGTACAAATGTGCTGAGCNCGTAAGAGACGTCATAGCTGCTGTCGTCCATCGTTACA
ACGCTCCGTGCTGTTACTCGTGGCCACTTACTCACCGAAAGTGCTCTGCGGTCGTCACGACGCGACTCGAACGCGCACACCTTCATTTGTATGCCAACAA
TCAAATCTCACATCGCTACATACAATCACTAACTAACGAAGGAAAAGCTTCCAATACAGCATGGCGCCCCCCGACACTCAGCAACCACCGACGCGAACGC
GGCACCCACACACCAAGACGCAAGAATCA
>LE_HBa0183O23_T7_125917 (trimmed for quality and cloning vector)
CT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
3.4054
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0183O23
Clone
Clone name
hba-183o23
LE_HBa0183O23
P183O23
Clone type
BAC
Contamination
none
Estimated length
87,394
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found