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Clone Read LE_HBa0092N09_SP6_27136

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0092N09_SP6_27136
Primer
SP6
ID from Seq. Facility
LE_HBa_092_N09-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
686 trimmed for vector and quality, 929 raw
Sequence
>LE_HBa0092N09_SP6_27136 (raw untrimmed)
CCCCGGCTTATTTGACGTGTATTAAAACCAGTATTGGCTGCAGCTAATTACAGCCCAAGAAAAGCATGGATCTCACTCTCAAAATCTTTTCCCCTGATTC
TAATCTTTCAAAATGTTGGCTAAACATGAAACGTAAGAAGATATTAAATATCAGGAAATAGTTCATGGTCTTCCTATATAACAAGGTTTCTAGTACATCA
AGCAAAGATGACCTTCTGAATGAAAAGGTTAATCCTTTTTCTTCTTTTATGAAACAACTATCCTCTCAATAGGTAGTCATACAAAAGGTGAGACAAACAT
CAAACTTGACCCTGAAGACATCCATATGTGATGAATTAAACTAATTGGAACAGTCCAGTTAAGCTCTTAATTTGTAATCCTTCAGACATTTTTTAAATGA
GGTGTATGGGCATGTCGTCAAGTATATGTGATTACTTCTGGATTTTTTAATTCCTTAAGCAAATGCCAACAACAAAATGATGCTGCAACATCAACTACAA
TAGAATAACACATAGTGTGAAACCTCTATGCAAGTAATTCAATAACATTTATACGTTCAAGGCAGTCAGTAACTGCAATGCTCACTTTGGACAATTCTAA
ATATATCTATGACAACCATAAATAAAAATTGATCAATTTACAATGACGCCTGCTAAAATATTTAAAGCCAATGGAAGCAAAAGATATTTAAAAATTTACC
GTTTTCCTTGTACCACTTCGGTGTCAACCTTTCCTCATTTGAACCAACACAACAATGAAAAGCAGGCAGACGTGCCAGATCTGCATAGAATAAAATCTCA
AAAGGTTAAAAATTAATGAACAAAGGAGAGAAAAGAAGAAACATTTCATCCTGAAAACTCTTGTTAAGTGACTGTAACCAGAGCCAGGGATTATTCACTA
TTAATGCTTGTAGGAATTTTCCCAAGTTC
>LE_HBa0092N09_SP6_27136 (trimmed for quality and cloning vector)
CTGCAGCTAATTACAGCCCAAGAAAAGCATGGATCTCACTCTCAAAATCTTTTCCCCTGATTCTAATCTTTCAAAATGTTGGCTAAACATGAAACGTAAG
AAGATATTAAATATCAGGAAATAGTTCATGGTCTTCCTATATAACAAGGTTTCTAGTACATCAAGCAAAGATGACCTTCTGAATGAAAAGGTTAATCCTT
TTTCTTCTTTTATGAAACAACTATCCTCTCAATAGGTAGTCATACAAAAGGTGAGACAAACATCAAACTTGACCCTGAAGACATCCATATGTGATGAATT
AAACTAATTGGAACAGTCCAGTTAAGCTCTTAATTTGTAATCCTTCAGACATTTTTTAAATGAGGTGTATGGGCATGTCGTCAAGTATATGTGATTACTT
CTGGATTTTTTAATTCCTTAAGCAAATGCCAACAACAAAATGATGCTGCAACATCAACTACAATAGAATAACACATAGTGTGAAACCTCTATGCAAGTAA
TTCAATAACATTTATACGTTCAAGGCAGTCAGTAACTGCAATGCTCACTTTGGACAATTCTAAATATATCTATGACAACCATAAATAAAAATTGATCAAT
TTACAATGACGCCTGCTAAAATATTTAAAGCCAATGGAAGCAAAAGATATTTAAAAATTTACCGTTTTCCTTGTACCACTTCGGTG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.946514
Expected error %
0.122772
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0092N09
Clone
Clone name
hba-92n9
LE_HBa0092N09
C02HBa0092N09
P092N09
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found