Clone Read LE_HBa0196N05_SP6_267651

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0196N05_SP6_267651
Primer
SP6
ID from Seq. Facility
LE_HBa_196_N05-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
436 trimmed for vector and quality, 993 raw
Genbank Accession
DU085075
Sequence
>LE_HBa0196N05_SP6_267651 (raw untrimmed)
NNGGGTGTTACACTCGGGACCTTTCCTTTTGATACTTACAAACTTCATTCTTGAATGTTATATCTCAAAATTTATACGAAATTAGCAAACGTCTAACCGC
GTTGGGGTATATATCTGCAACTTCACATTCAAGATTCCAAATAGTAAACAGAATGTGTGCCATTAACAAGTGATACAGAATATGACAAGTGAAAAATTCA
GCATGATCACAAAAAAAATTCCAGCTTTCAATTAAGTCATAATATCTAAGATGATAGATTATGAAGAAAATATGAAAAAGGGCAATCTCTAAATCTCAAA
CTAATTAACTGAACAAGAAATATGGAGAAGCTAACTACCATAAATCCAATGTTCCTCCATCAACACACTTTCTAGCCAGAAATAGGAATTTGGGAAAATC
ACAAGTTAATATACATAAAAACAAAAATAAAAATTATGATAAAAACATACAATTTATAAAACATCCAGTGTTTTTGTCCCAATATATGAACCCCGCCTAG
CCCGCTTCTTCATTGAAGAGATAACATCACTCAAGTAACTTTTTTCTAAGAATATTACTTAAACCTTTAGCTAAACCAACAATCTCCCAAAAATACCCAA
CTCCATCTAAATTCAAGAAGCTTCTATTAGGGGAATCTTAATTAAAAATTTTTGAATTTCCCACCCTTGGAATCCCCCTCCATTACTACGTTCAAACTAT
CATTAAGACGGAATTATTGTTTTCAAAAACCCTACCCTTCTAATCCTCCGAAATATGGTCATGCTTTAACAATAAATGGAACCTCTTTTAAAATCTTCTC
ATTTTATTCTTGCAACAAGCACTTGATCATTTTATTCCCCCTTCTAGCAAATAACATTACACTTGGTTCCTTCTTTCCAATCTATTCCCAAATTTATACT
GACTCTTTCTCCTCTCGTATATCTCCTAATCTCATCCTTCATCTTTTAATTTCCACGCGTGTTTCCTCCTATCTTCCTATTCGTATCATGTCG
>LE_HBa0196N05_SP6_267651 (trimmed for quality and cloning vector)
CATTCTTGAATGTTATATCTCAAAATTTATACGAAATTAGCAAACGTCTAACCGCGTTGGGGTATATATCTGCAACTTCACATTCAAGATTCCAAATAGT
AAACAGAATGTGTGCCATTAACAAGTGATACAGAATATGACAAGTGAAAAATTCAGCATGATCACAAAAAAAATTCCAGCTTTCAATTAAGTCATAATAT
CTAAGATGATAGATTATGAAGAAAATATGAAAAAGGGCAATCTCTAAATCTCAAACTAATTAACTGAACAAGAAATATGGAGAAGCTAACTACCATAAAT
CCAATGTTCCTCCATCAACACACTTTCTAGCCAGAAATAGGAATTTGGGAAAATCACAAGTTAATATACATAAAAACAAAAATAAAAATTATGATAAAAA
CATACAATTTATAAAACATCCAGTGTTTTTGTCCCA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.902221
Expected error %
0.453717
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0196N05
Clone
Clone name
hba-196n5
LE_HBa0196N05
P196N05
Clone type
BAC
Contamination
none
Estimated length
107,103
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found