Clone Read LE_HBa0092F05_SP6_26744

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0092F05_SP6_26744
Primer
SP6
ID from Seq. Facility
LE_HBa_092_F05-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
780 trimmed for vector and quality, 935 raw
Sequence
>LE_HBa0092F05_SP6_26744 (raw untrimmed)
CCAGGGCTTTTTTGCTCTCACTACCTTTATATATAGTGTTTGAAATATCTAAATTTAAACTATAATAATTTATTAATTCTTTCACTAGCAAAACTCCAAT
TATATTTTCATGTTCAAAGCACAATTTCAACTTTCAAATACTACTTTTTTTAAAAAAATTCTGAATATTTGCTCACTAATTATCTTCTGTGAGTTTTCCA
TTAATTTCTATGAAATCAAACAAATGGGGAGAATATAAAATTAGGAATGTTAGCCTGAAAGGAAGAGACCAAGATTCAGCAGTTGTTGCTGCCGTTCACG
TCTCCTGTTTTAGCTTCTTCGTTAGTACTGCATTTCCCTTCTTCCTCTTCTCGTGATTTATTATTCTTCTTTCTTGTAATTTTGTGCGAGTACTTAGCAA
AAGCAGCCGAAAGTGCTGACTTGACAGTCACTTCGGGTTCTTTCTTCGCACTGTTGCTTGTATCCACGATTTCTTTCTCATCTTCCTTTGTGTTGCTGGA
GCCAGGATGAGATTCATTAGCGACTGAAGTTTCTGGAATGCATTGGCGTTTTGGCACTTCTCGCTTGAAAGGTTCATGAAAAGCATCATACAAGCGTTTT
ACCTGATCCATCACAAGTTCGATGAGTAAATCAAACTGAACAAAGAAGTAACTGGCAATAACATTGAAGCACTCTGTAGGATCTTAATAACTAGCTAATT
GATTTTCTTTGCTCTTGTAAGAGATTGGTATGTCAATGGAAAATATTAAGAACTTCTAGTGGCAGCGACTCCAGATTCTAAATAAGGAACAAATAGGTTC
AAATGGAGCAAAATGGATAGTGAGGATTGTTATAGCCAACCCCACAAACTTGGGATTTAGGCATAGTTGTTATCGACTTTTTTGCTTCTCACATCCTCTT
TAGACTGCTTCCGTCATAAAGCCACAACAAGAAAG
>LE_HBa0092F05_SP6_26744 (trimmed for quality and cloning vector)
TTATATATAGTGTTTGAAATATCTAAATTTAAACTATAATAATTTATTAATTCTTTCACTAGCAAAACTCCAATTATATTTTCATGTTCAAAGCACAATT
TCAACTTTCAAATACTACTTTTTTTAAAAAAATTCTGAATATTTGCTCACTAATTATCTTCTGTGAGTTTTCCATTAATTTCTATGAAATCAAACAAATG
GGGAGAATATAAAATTAGGAATGTTAGCCTGAAAGGAAGAGACCAAGATTCAGCAGTTGTTGCTGCCGTTCACGTCTCCTGTTTTAGCTTCTTCGTTAGT
ACTGCATTTCCCTTCTTCCTCTTCTCGTGATTTATTATTCTTCTTTCTTGTAATTTTGTGCGAGTACTTAGCAAAAGCAGCCGAAAGTGCTGACTTGACA
GTCACTTCGGGTTCTTTCTTCGCACTGTTGCTTGTATCCACGATTTCTTTCTCATCTTCCTTTGTGTTGCTGGAGCCAGGATGAGATTCATTAGCGACTG
AAGTTTCTGGAATGCATTGGCGTTTTGGCACTTCTCGCTTGAAAGGTTCATGAAAAGCATCATACAAGCGTTTTACCTGATCCATCACAAGTTCGATGAG
TAAATCAAACTGAACAAAGAAGTAACTGGCAATAACATTGAAGCACTCTGTAGGATCTTAATAACTAGCTAATTGATTTTCTTTGCTCTTGTAAGAGATT
GGTATGTCAATGGAAAATATTAAGAACTTCTAGTGGCAGCGACTCCAGATTCTAAATAAGGAACAAATAGGTTCAAATGG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.94799
Expected error %
0.172543
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0092F05
Clone
Clone name
hba-92f5
LE_HBa0092F05
P092F05
Clone type
BAC
Contamination
none
Estimated length
99,686
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found