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Clone Read LE_HBa0177L08_SP6_264384

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0177L08_SP6_264384
Primer
SP6
ID from Seq. Facility
LE_HBa_177_L08-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
559 trimmed for vector and quality, 987 raw
Sequence
>LE_HBa0177L08_SP6_264384 (raw untrimmed)
GAAAATTTATATATATATAGGGACTCCTTGAAATNAACACTAATTGAACCTGTAATGATAATTTTGTATGTGTGTTACCTAGAAAGTTTTGCTCTTGCAT
TGAGCATTTCGATGCGCTCTTATGCATGCCATTTGTTTTTTTTTTCATTGTGATATTTCATTGAAGGTTGTGATATATTCTTTTAAATGTCTGATACACA
ATTTTTTCTTGAGCTTGTCTTGCTTTCAAAGGCCCTTCTGCAGTACACCGTAATGGATTCCAAAAGACTGTAGGTTGAATCTAGATGGCTATAAGCCCAA
CAAACCATGCGCCATGCCTTCAGATTTTTAAGTTGGAGCCTGTCTGCTTGCATCTCTTTATTTGTCCATAGTCTATGCACTTGTTTCTACCAATTCCCGT
TGTCAAGCATACCAAATATGACCAACCGGTACATGAAGTCACGCTATCAGTAGTGCCTTCTTGGTAATCCAAGAATCTGCTTGCGTTTGAACAATTAGAC
CTTCAGTGTGTTTGATTTTAATGAATTGGAGTCTGTTTTATATACTTTTCTGAGGCAATAATGCCCTATGTCGCATGTCTTTTGTGGAGCATGGCTGCTA
CATTTACTTCCGAGTGTACCATTTTCTTCCACTATCCAGACAGTTGAGAAAAATAATATTCATTCTTGTGAAACGTTATCTTCATTCCTTGGGAATATCT
TTGACTTCTTAAAGTGGCTAGGAAAAAATAATTATTGTTTTTTAAACATAAAAAATGATTTACACGATTTAGGTCTATGGCCAAAGGAGTTAACTCTTTA
ATCATGATTTTTTTCCTCCTATTAATCTCTCCTACTAATACTATAATGCGAATTTTCTATTTTAATCTGCCTTTTACCCTTCTTACATATTTACCTCTGA
ATTATTATTCTATTTATTTATGACACTTTTAATATTCGGTTTGGTTCTTTAACTCCCTTTTCTATTCACACATGTCTTTAATTCTTG
>LE_HBa0177L08_SP6_264384 (trimmed for quality and cloning vector)
ATATATATATAGGGACTCCTTGAAATNAACACTAATTGAACCTGTAATGATAATTTTGTATGTGTGTTACCTAGAAAGTTTTGCTCTTGCATTGAGCATT
TCGATGCGCTCTTATGCATGCCATTTGTTTTTTTTTTCATTGTGATATTTCATTGAAGGTTGTGATATATTCTTTTAAATGTCTGATACACAATTTTTTC
TTGAGCTTGTCTTGCTTTCAAAGGCCCTTCTGCAGTACACCGTAATGGATTCCAAAAGACTGTAGGTTGAATCTAGATGGCTATAAGCCCAACAAACCAT
GCGCCATGCCTTCAGATTTTTAAGTTGGAGCCTGTCTGCTTGCATCTCTTTATTTGTCCATAGTCTATGCACTTGTTTCTACCAATTCCCGTTGTCAAGC
ATACCAAATATGACCAACCGGTACATGAAGTCACGCTATCAGTAGTGCCTTCTTGGTAATCCAAGAATCTGCTTGCGTTTGAACAATTAGACCTTCAGTG
TGTTTGATTTTAATGAATTGGAGTCTGTTTTATATACTTTTCTGAGGCAATAATGCCCT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.957241
Expected error %
0.564748
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0177L08
Clone
Clone name
hba-177l8
LE_HBa0177L08
C03HBa0177L08
P177L08
Clone type
BAC
Contamination
none
Estimated length
88,308
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found