Clone Read LE_HBa0175K09_SP6_263790

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0175K09_SP6_263790
Primer
SP6
ID from Seq. Facility
LE_HBa_175_K09-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
644 trimmed for vector and quality, 1024 raw
Genbank Accession
Sequence
>LE_HBa0175K09_SP6_263790 (raw untrimmed)
GAGTGTTTATCTAACATGGATATAAATATAATTGGTCACGTACTTTACTAATTTACAGCTACTGGGTAAAATTAAGAAACTCTCCCACTAAGACCTCATG
ATAAATAGTCAATCTTTATCTCTTGTTTATACTTTTAAAGTTTATTTTCACATTCATTTACACAACTTAAGTACTATTTACCTTCTAGTTGTCACGACCC
AGATCATCATGATTGACACCCACACTAGCCCTCCGGTGGGGGAACCATTAATACTAATTAGCTAACCAAAAAATACAAAACTTAATCAAGATTAAGGCGT
GTGAAGTTACGGGAGAAGGTTTAAATGCTCAAGAAAAAATAGAGTTTCCAAAAACTCCAAAATGCTAATCAAACGAATGCGGAATAATATCTAGAATTTG
AAAGTCAATGTACCAAGACATCTAAAGTTCAACAAGTCTGAGAAAATAGTTACGACCCAATTAAACATACAAAAATCCTAATGTACTAGTGTAAGTCTGA
AATGGGGGCATAAACGAAAGAAGAACTCATAGTAGCCCAAAAAAACTAAATCACCCTTGAATTCGATGACGATCACAGATCTTCTAAATGAGGTCTGGCA
GTGGCCTCTGGAAGATGTCATGTACTCAACAAATAAAGAACAAATGCAATATCAATACATAACCACAGTGTACTGGTATTATCATGTGGCTATCCCACTA
AATGCAACTTATATAATCCCTTGGCAACCAATAATAATAACATGCATTCACCCGAATCTTACACAATATTAAATCACTTCCGAACAACGTTCAACTTCCC
AAATTTCAAGAACATACATTAATTTTTTAATTCAAGGGTCCCTCTCTGGGAAATCGAAACCTCAAACGGGTAAGGGGATAAGGGAAGGGGCTAACCCGTT
TCCAGGTATGGTAGGGCCGGAAATCGGGACACTCGCTCCAAAGGGTTTTTGGGCGGGAACGGGGTACACCGTTTCCTATTATAATCTCATTTTTAACAAA
AGTACCGCCATTCCGATTTAAAAA
>LE_HBa0175K09_SP6_263790 (trimmed for quality and cloning vector)
TGGATATAAATATAATTGGTCACGTACTTTACTAATTTACAGCTACTGGGTAAAATTAAGAAACTCTCCCACTAAGACCTCATGATAAATAGTCAATCTT
TATCTCTTGTTTATACTTTTAAAGTTTATTTTCACATTCATTTACACAACTTAAGTACTATTTACCTTCTAGTTGTCACGACCCAGATCATCATGATTGA
CACCCACACTAGCCCTCCGGTGGGGGAACCATTAATACTAATTAGCTAACCAAAAAATACAAAACTTAATCAAGATTAAGGCGTGTGAAGTTACGGGAGA
AGGTTTAAATGCTCAAGAAAAAATAGAGTTTCCAAAAACTCCAAAATGCTAATCAAACGAATGCGGAATAATATCTAGAATTTGAAAGTCAATGTACCAA
GACATCTAAAGTTCAACAAGTCTGAGAAAATAGTTACGACCCAATTAAACATACAAAAATCCTAATGTACTAGTGTAAGTCTGAAATGGGGGCATAAACG
AAAGAAGAACTCATAGTAGCCCAAAAAAACTAAATCACCCTTGAATTCGATGACGATCACAGATCTTCTAAATGAGGTCTGGCAGTGGCCTCTGGAAGAT
GTCATGTACTCAACAAATAAAGAACAAATGCAATATCAATACAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.947549
Expected error %
0.138695
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0175K09
Clone
Clone name
hba-175k9
LE_HBa0175K09
P175K09
Clone type
BAC
Contamination
none
Estimated length
108,482
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found