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Clone Read LE_HBa0168O11_SP6_263203

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0168O11_SP6_263203
Primer
SP6
ID from Seq. Facility
LE_HBa_168_O11-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1748 raw
Sequence
>LE_HBa0168O11_SP6_263203 (raw untrimmed)
TTGCTATCGTCCTACAGCGAACTGTAGCTTCTCGCCCGCTGCTGAAACATCTCTGTTAGCTACTACTCAGTGCACTCACCTCCTGTCTATCACCTGCTCC
TCACACATAGCTTCGATTCACTATACATATCGCCCTTACGCTTCCGAGAAGGAGGTCGACACCTCTTACCCGTGATTCGTTCGNCTTTCTACTATGATGT
CACTTGCCCCTGTACACTCACTAGACCTTGNCTTATAGTTCGAATACTACGCTCCTCTACGATACTCGCCTGCACTGCCTTACGCGCCGTTGCGCACTTG
TCTATCGCGATGTTTTANAACAGAATCTCCCACGATCTGCTGTCGTATGCTGCACACTATTACTCTACGCCATCACTATAACTATTGCTCAATACATCTT
TCGTAGAGTCCCCGTCTTACAACACGCATCTACAGCTCGCCGACGCGTGGTATACTGATTTTCTACTATATCACACTCTGACACCGCTACCTTGCGATGC
GCTGTCTTGTCTACCCTCCAGTTCTCTGATGCTCACTAGTCTCGCTCTCTCTTGCGCTGCACATCGCCGCTGTCGACTCTAGCACACTGCACTAGCACTT
CTCTCCACTCCGTGCGCGAATTGCTGCTGTGCACGGTTGCACTCATACTTCCATGATGCAGCGTCTCATCCATCTGTACTCTTTTGATCATCTACAACAT
GTCTACCGTTGTTATATACTATACCTTGCGCCACTCTAACACTGAGCGTCTATATTGCTGTAACTTTCCAATCCGCTGCTCATGACTATACATCGTCCCA
CATTCACCACGCTCTTTGTACTCGCCCTCTTCTGTCTTCTTGTCTTTCTCAATCCTTCACTCTCACTCTCCTCCTACTCTCTGCGCATACCGCATATCAC
ACACTTATCTCTTGTTTCTCATTCTCATCCTCATTGTATCTAAGTTTGCCGCACATTACAGTGCGTAGACGACCCTCTATCTCTTATGCGCTACACTGCC
TGCCTGTTCTCTCTCTCTCCACATCACTTCGTCACTCTCCCCAGTACATCTACCTCGTCACTCTCTCNCTCCGTGCGTCTGTCAATCTGCTCATGCTCCT
CTTACTCTATCCACTTACCCTTCTGTCCTGCCTCTACTCTCGCGTCCTCCACTCGCATACCGTTCCTACGTACTTACCTTCATCTACTTCTCTCCCACCC
TGCCGACTCGGAAACCTCTATTGTGTTCTCTACACTTACTACTCTCTTTCTACCACTAACGCTAGACTCTACTTACTGCTNCATATCTTACCAACGTGAC
TCTGCTCGTGCCTGCTCACGATCTACGTCTGTCTCATTGCATGTCCCTACTCACCCTCATGCTCAACTCATCATGACCTCTAGCAGTGCTCTTCCGCTCT
TCACGCGTCCGATCGACTCGCAGCTGCATTATCTCGTACCAACATGCAAGACCTCACTGATGCTCCTACTACGCTACACCTACTATCTCATGGCCAACTG
ATCAACGTGCACGACACTTTGCGTGCCCATTGATGTCCTGATATGCACATTTGCCTTGTCATCTCACGATCTCGTGCGCTGTTTCGCTCTCCATCATCTC
TCTTGCCTCTTGTCTTGCTCAGCCACACCACTGCTTCTACATCCTGTCGTTTATGTACTTACCTGCTACTCTACTCGTCGCTCCATATACTCTCTATCCT
CCTCTCAACAGCTGGTCCTTCTGCGCGCTGCTAATCACGTAGACTGCG
>LE_HBa0168O11_SP6_263203 (trimmed for quality and cloning vector)
T

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
  • High predicted error rate
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0168O11
Clone
Clone name
hba-168o11
LE_HBa0168O11
P168O11
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found