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Clone Read LE_HBa0168M24_SP6_263172

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0168M24_SP6_263172
Primer
SP6
ID from Seq. Facility
LE_HBa_168_M24-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
290 trimmed for vector and quality, 929 raw
Genbank Accession
DU083685
Sequence
>LE_HBa0168M24_SP6_263172 (raw untrimmed)
CAAGCCCGAGTTGTTTGATCGATGTACTAGTTTAATGGATGTTGAGCACCTCTTGACATCTGATAACTCAAAGATCTTATTCTTGGAGGTCATTTCGGGT
AACTGAGTTATTTCTTTGTTTATTTATTTCTTTCATCACTGGAAGTTAATGTTTGTTCTTCTTCTATTATGGTGCTGTAGAATCTAATGTAGTGCTGCCC
AGCAAATTTTCAACTGTTCCACTCATTGCTACTGTGGCTGATTCTGTTTTTCAGGTGTGTGCTTTGTGCAAGATGCATATGCATTTCGAGTTGGAAAGCT
AAATACTGTTATCGACTATATTATTATGTTACAGTTTCGTTTGTTGCCATTTTTGCTTATGCTTCTGTTACTTACTTATTAGTGCCTAGCTATTCTTTCT
ACGTTATGCTATCTATTTCTTCTTATTTTATTGTGGGGTTTACATAAAACACCTCTTTTTTTTCTTTCTCCCTGCTTACTGATTTTTTCATATATTTTTC
ACTTATCATAAAATTTTTTCTTGTTTCTATCCTTCACTAATTTCTATATATTCTTTTCCCTTATATTATTCACTTCTCTCTAATACTAACTTTGTCCTAT
TTTTTATTTGCATATACTTCTTAGTCTCTTCCTACTTTTCTCCTAAGTAATCTTTATTATTATTCTCCTTTACTATCGCATATTATCTGTTAGTCTTCTT
ATCTTATATAACATCTCATTTCTATTTTACAATTATTCAATCTTCTCAACTCACCCCTCTTTTACCTTTTCTTTTTTTCTATCCCTTAAAGTTAATCAAT
ATCTTTACTTCTTCTCTATTTTATATTGTTCTTTCCAAATTTAGTCAGCCATTTCCTCTCTACATTTTTTCTTTTCCTTCTATCTCTCTTGATCATTTAT
AACATTATTTCTCTTCTTCTTATATTTAC
>LE_HBa0168M24_SP6_263172 (trimmed for quality and cloning vector)
CCCGAGTTGTTTGATCGATGTACTAGTTTAATGGATGTTGAGCACCTCTTGACATCTGATAACTCAAAGATCTTATTCTTGGAGGTCATTTCGGGTAACT
GAGTTATTTCTTTGTTTATTTATTTCTTTCATCACTGGAAGTTAATGTTTGTTCTTCTTCTATTATGGTGCTGTAGAATCTAATGTAGTGCTGCCCAGCA
AATTTTCAACTGTTCCACTCATTGCTACTGTGGCTGATTCTGTTTTTCAGGTGTGTGCTTTGTGCAAGATGCATATGCATTTCGAGTTGG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.937103
Expected error %
0.864523
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0168M24
Clone
Clone name
hba-168m24
LE_HBa0168M24
C08HBa0168M24
P168M24
Clone type
BAC
Contamination
none
Estimated length
82,728
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found