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Clone Read LE_HBa0168M24_T7_123950

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0168M24_T7_123950
Primer
T7
ID from Seq. Facility
LE_HBa_168_M24-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
30 trimmed for vector and quality, 865 raw
Sequence
>LE_HBa0168M24_T7_123950 (raw untrimmed)
ACATACCTCCCGCCATAAGCCGTCCCGGGCGATCCCTAGAGTCGACCTGCAGGCATGCAAGCTTGTCACAGCAAATACAGCTGACCCCTTTGAAAGCCCC
ACATCACCGCAGCAGCAGTCTTGCAGCGGTCCCTTTCAAGTTCACCATTCTACCGTTGGACCGCCTGAGAACGTCGGGAGGAGTGTGAAGGGGAATCCGG
GCATGCTCCTCACCCACCCCGAGAGAGGAAAGGAAGAATAATAAGAAAGAGGCACAACAAAAAAAAAAAGTTTGTCTTTCACTTTAAAAAATTCCCCCTA
ACCCTTTTCCACTTTTTTTCTTTTGTATTTTTTTTTGTAATTTTTACTGATTAGTGCATTCGAATGCCAATTGCATAACTATGAGAAAGCACCTATCTCC
CTTTCTAGGCTCAGAGAACATAGAGGGTTTGAATCTTAAGCTAAAAAGAAGAGATACAACAACCCTTATGCTAAGGGACTCTGAGAACCTTTTTCAGATA
CTTTAACTATTTCCCCCGCCCACACCCCATCAAAGTCTTCCTTCTATTTCCTTTGCCTTCTCTTCCCTCCCACATCCCCTGATACTACCTTCTTTCTCTG
CGAAGCGCCTTGTCACATTCTATCGCCTACCTAAAGGCATATTTTGATTTCTGTTTATCTGTAGCCCAATTCTAGCTAAGGCTCCCCCGCAATAAAATAT
TACAAAATAATATCCTTCGCGTCCGCGCGGTCGCCGCACGCATCGCGGTGGGCTACCCTCCACAATAATTATCTATGTTTATAAATACTGGTACCCAAAA
TTGGTTTTCCGCCAACCCTACTTTTTCTCCTATCCCTGGCCTCATATTCAAGATGCGAAACAATA
>LE_HBa0168M24_T7_123950 (trimmed for quality and cloning vector)
GCATGCAAGCTTGTCACAGCAAATACAGCT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.1015
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0168M24
Clone
Clone name
hba-168m24
LE_HBa0168M24
C08HBa0168M24
P168M24
Clone type
BAC
Contamination
none
Estimated length
82,728
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found