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Clone Read LE_HBa0165J09_SP6_262711

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0165J09_SP6_262711
Primer
SP6
ID from Seq. Facility
LE_HBa_165_J09-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
546 trimmed for vector and quality, 969 raw
Sequence
>LE_HBa0165J09_SP6_262711 (raw untrimmed)
TTCTTTTCCAAAATAATCTGGGAGTGACATCTCCTCTTTCTTATATTTCTAATTTTTAATTGTTAATTACCAATTAATTCAAATGCTAATTAATGGAATA
AGCAGTAGTTGAGCTAGGAGATACAAAAGGCCTATTTGTTAATTAGTATTTAGGAGTTACAAAAGTTTTGAAAGTAAACGGATGTCTTTTCCTATTACGA
GTAGAATCTTCGAATTAATAGAATTTTATATATATATATATATATATATATATATATATATATATATATTCTTGGCTTTAGAGACATGCCACATCAGCGA
CTTCATGTTTCCGCTTTATATAAGTATAATATATAATGGTTACATCGATTGTAAATGAATTTTAGTTTTTATTGTCATTGTTAATACCCTAATCTTTAAG
AATTCGTTCCAGGGAGGATTTTATGATCTATCAATTAAAATATCTCCTTGTGTGGTGTAACGAAGAACTCTCGAAAAGATCCACTGAGACTCCATCCACG
GTCACATGGAAATCTCTTCATACTTGTCAAGGACTAGTGAGATCTTTGATCTTCGATCTGCGTGCCTGAGAGTAGCTTAAATAAAAAAAAGTCTGATCTA
ACTTGAATTTGGACTGCCCGATCTGGCTACTACTATGACCGAAAATGGTGATGTGTGAGGGCCTCCCTCATACCCCCTTAATTATTAAATGGTCCCTACT
ACTTTGGTTTGATTCGGAATTCTTAATTTAATCTTAAGTAAATCGGATCGTCCGTCATTTCTAAAAGTAGAAATTAAATCTTCTTAACCCGCTGCGTTAA
GTAGATATTTACGTTTACTTATTTTCCCCTATAAATCAAATTCCACCTATACTCGATACACGTCTGGATCTCTAATATGAATTGATCACCTGGCATATTC
AATACGCATATATGCTCTGTCTGTTTATAACTAAATGCCCTCACTACCTAATTTGGTACTCTATCACCC
>LE_HBa0165J09_SP6_262711 (trimmed for quality and cloning vector)
TTCTTTTCCAAAATAATCTGGGAGTGACATCTCCTCTTTCTTATATTTCTAATTTTTAATTGTTAATTACCAATTAATTCAAATGCTAATTAATGGAATA
AGCAGTAGTTGAGCTAGGAGATACAAAAGGCCTATTTGTTAATTAGTATTTAGGAGTTACAAAAGTTTTGAAAGTAAACGGATGTCTTTTCCTATTACGA
GTAGAATCTTCGAATTAATAGAATTTTATATATATATATATATATATATATATATATATATATATATATTCTTGGCTTTAGAGACATGCCACATCAGCGA
CTTCATGTTTCCGCTTTATATAAGTATAATATATAATGGTTACATCGATTGTAAATGAATTTTAGTTTTTATTGTCATTGTTAATACCCTAATCTTTAAG
AATTCGTTCCAGGGAGGATTTTATGATCTATCAATTAAAATATCTCCTTGTGTGGTGTAACGAAGAACTCTCGAAAAGATCCACTGAGACTCCATCCACG
GTCACATGGAAATCTCTTCATACTTGTCAAGGACTAGTGAGATCTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.921404
Expected error %
0.0173413
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0165J09
Clone
Clone name
hba-165j9
LE_HBa0165J09
P165J09
Clone type
BAC
Contamination
none
Estimated length
94,793
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found