Clone Read LE_HBa0163K05_SP6_262196

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0163K05_SP6_262196
Primer
SP6
ID from Seq. Facility
LE_HBa_163_K05-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
97 trimmed for vector and quality, 866 raw
Sequence
>LE_HBa0163K05_SP6_262196 (raw untrimmed)
GCTAGACAACTGGTCTTGGGAACTTATTAGTAGGACCAAGCTGCCAACTAAGGTTGTTTGTTTTACTTGGACAGCTTTATATGAGGCATCTTACCCGAGA
CCATCTATGGAGAAGGATATTTCCGCTCCTACATAGATGCTATATGTGCAAAACAGAGGCTAGAAATCACCCTATATCTTCCTTGTTGCGAGGAGGCATC
ATTAATGTGGAACTGTGTCCATTGTCTATTAAGGTCAACAAGATTCATATTCCACCTTCATGTCGCTATCTAACAGACAAGCATTTGTTTACTATATCAT
TACTCCACTCATTTATCATTTCATTTTAATCTGACTATTTGAGAAATCTGGCATATAAAAAATAATGATACTCTTATTTTTTAATTTACTGTGTAGGTTT
AAGGATGATGGTTTTTCACTTCATGTTGAGATGTTGACTATATAAAATTATTTTGTCCTTGTATTCTTCTTAATATCGTCTATTTTATTGATTTCTTATC
TTATAAATTTCTATCCTATCATTTTTTCTCTTTTTTGTGTCTCTAACCTTCTTATCGTGCTTTCTTGTTTTCTAATACGTTTTTTCTTTTGCATCAAATT
TTCGGTCTTATCTCATTTTTACAATTCTGTTTTCTCCTTATCTGTGTATCTGATTTCTACTAATCTTTATTGTTTTCTTTATCTTTCATCAGCTTAATTT
CTCAATTTCTCTTTGCTTTTTCTCTTTCTTCTTTCTTTTTTGTCTTTCCCATTTACTCCACTTTTTTCTTTATAAACATCTTATAATGTTATATTTTTTT
TGTTTTATTCTTTCCATTCTACTTGCTATATTTGCTATTTCTCGCTTTTAAATTGAATTTAAACTG
>LE_HBa0163K05_SP6_262196 (trimmed for quality and cloning vector)
TGGTCTTGGGAACTTATTAGTAGGACCAAGCTGCCAACTAAGGTTGTTTGTTTTACTTGGACAGCTTTATATGAGGCATCTTACCCGAGACCATCTA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.928062
Expected error %
1.63365
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0163K05
Clone
Clone name
hba-163k5
LE_HBa0163K05
P163K05
Clone type
BAC
Contamination
none
Estimated length
79,312
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found