Clone Read LE_HBa0163K05_T7_123499

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0163K05_T7_123499
Primer
T7
ID from Seq. Facility
LE_HBa_163_K05-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
328 trimmed for vector and quality, 904 raw
Sequence
>LE_HBa0163K05_T7_123499 (raw untrimmed)
ATCCAGCTGGTACCCGGGGGACCTCTAGAGTCGACCTGCAGGCATGCAAGCTTCGAATGCCTCCATCTCGTTTTTTGGTTGAGATTGGTGCACCGCTACA
TTGACTTTGACAAAAAATTGGGTCACAAAAGCCTGGGCCGATTCCACACCAACCAGCGTTACCACAACATTGTCCAGTAGGACATGATTTACCATCAGCT
TGCCATCCGCATCGTCCCTCTGGATATGGACCTGGACATTGCATCTGACAATATCCAGGAAAACAATACTCGTATGTGTTTCCACACATACCCGATATAC
CACAACACTCTCCGGTTCTATTACATTTCGTGCCACCATTTTGCATTCCACATTGGTATTGTGAAGGTGGAGGTGAAGGTGGGGNTTATTTTGGAATATA
TGGATGAGTATGTTTTGAAGATNTGGGTAGTGAATTTGTAGTTAATATTATGTTTAAGGTGTGGTAGTTGTTGTTATTTTTTGATTTTAGTTGGTGAATA
AAGTTAGATAGTAGTAAAATTGTATTAGATTAATAGTTTTGTTTAAGAGTATAAATATGATTGGATTTTTTGATGTAGTTAAGTATAATTTGGATGTAAT
AATAATGCAATCATATATTTAGATATCTTCAGATTATTATTTAGTCATTAAGATTGATAAGTACATCGTATATGCACCTCAATGGTGCCCATTGCTGCAC
TCTCCAGACGTTTTCTCCGCTTTGGCCTACAGCCCGATCGCCCTCTCACGTCATTACTCTTTCTTGCTCTCTCCCCATCTAAGACAGCTCAATTGGATTT
CATTTTCTCATCATTTATGGTCTATGCTTTTCATGGAGTTTATTAATGGAATCTATTTTTATATATAATCTCTATATTATATTATTAAAATATTTAATTT
TTTT
>LE_HBa0163K05_T7_123499 (trimmed for quality and cloning vector)
AGCTTCGAATGCCTCCATCTCGTTTTTTGGTTGAGATTGGTGCACCGCTACATTGACTTTGACAAAAAATTGGGTCACAAAAGCCTGGGCCGATTCCACA
CCAACCAGCGTTACCACAACATTGTCCAGTAGGACATGATTTACCATCAGCTTGCCATCCGCATCGTCCCTCTGGATATGGACCTGGACATTGCATCTGA
CAATATCCAGGAAAACAATACTCGTATGTGTTTCCACACATACCCGATATACCACAACACTCTCCGGTTCTATTACATTTCGTGCCACCATTTTGCATTC
CACATTGGTATTGTGAAGGTGGAGGTGA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.972458
Expected error %
0.208
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
sp|Q9S8M0|LECT_SOLTU Score 155 E Value 3e-37 Identity 63.30% Align. Length 326bp (99.39%) Frame 3
Chitin-binding lectin 1 precursor (PL-I)
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAF02299.1| Score 80 E Value 2e-14 Identity 17.00% Align. Length 269bp (82.01%) Frame 3
chitinase [Brassica juncea]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0163K05
Clone
Clone name
hba-163k5
LE_HBa0163K05
P163K05
Clone type
BAC
Contamination
none
Estimated length
79,312
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found