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Clone Read LE_HBa0184G14_T7_257497

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0184G14_T7_257497
Primer
T7
ID from Seq. Facility
LE_HBa_184_G14-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
65 trimmed for vector and quality, 905 raw
Sequence
>LE_HBa0184G14_T7_257497 (raw untrimmed)
NNTTACTGCTCGGAGACCTCTCAGTCTACTGCAGGCCTGCAAGCTTTCTGTGTCAATTCTTACCGTGCACGCATTACCTGCAAGACTTCCCCAACTACAT
ACGCTTTCTTTCCCCCAACAATGGAAGTCTCCGACTTCGTAGCTGCTTACTACCACCCACTAACTGTAACTTACATGGCAGTCAAGTTTTGCGAATGTTT
ACAGGTGGTATGAGTATTATGCGGAGCGCATTGTCATCTCGCAATCTACCATGTACTCAAGAAATGAGCCAGAAACATTGCATTTCCTAGCTCGCGGCAG
CTGGAACCAACTGAAATTGAAAAGCTACGTATCTGCTTCTGCTATACATGAATTTCTCTAGTTCTTTCTTTTATATTTTGGTGCCTGACGT
GTCTTTCCT
GTAGTTTTTTCATCCTTGCAAAGGATAATTTAAGGATACATACATTATAGATTGGTTCTAATAGAAGATCATTACACGTGGCCTCAAACTCATGGATCTC
CTATGCTTACCGTCAGCAGAATTCCCTTCTCTTAACCCCATGTATAAACACATTAATTGCATCAGAGGACTGATCAACGACATGTAATCAAGCATACATA
GATCTTACGATTCTACAGGGTAATGATCGCCTGACAGCGTACTACTGTAGCCTGCTCGTCCACTTGTAAAGGAACCACCTCACTTACTCTGACAGTCATG
AATAGCGAGGTGAAAATGACTCGAGATACATGTGAATTTCAGCAATTGAGATTAATAATACCTGCCCCCTATAACTCGAGTACATTCCTCAAAAACATTC
GTCACCGCGTGTCTGGCCACTGCAAATTCGTTATTTACAACTTCCTCCTTCNNCNCGAATCTTTGTTATGATCCAGGGCCTTCAGATTTGGACCTGGTCT
TGCAC
>LE_HBa0184G14_T7_257497 (trimmed for quality and cloning vector)
GTCTTTCCTGTAGTTTTTTCATCCTTGCAAAGGATAATTTAAGGATACATACATTATAGATTGGT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.88188
Expected error %
1.61068
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0184G14
Clone
Clone name
hba-184g14
LE_HBa0184G14
P184G14
Clone type
BAC
Contamination
none
Estimated length
85,580
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found