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Clone Read LE_HBa0184G14_SP6_126100

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0184G14_SP6_126100
Primer
SP6
ID from Seq. Facility
LE_HBa_184_G14-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1145 raw
Sequence
>LE_HBa0184G14_SP6_126100 (raw untrimmed)
GGTGGTGGGCAATAGACNCNCCCCTCATCCCTCCCCTCCCTCTTCTCTCCCATCTTACTCCTCTTCTTCATTTATTTCTCCNTCTTCATNTTTTTTCCCC
ACTTTCTTGGGCCCGCTCTTTCTGTCGTTTCCCGTGTTCCGTGGTGGGGCCCCCCCCTTTTAGGGAGGTCCGGCGCCTCCGTCTTCTTGGGCCGTTGTCC
CTGTTTGTTTCGTGCGTCGCTGCGTTTGCGGTTCAATTTTATGTGGATGGTTGGGTGGGCGTGCCCGCGCGCTTTGCGCTGCCTTTCCTGGGATCTTGCC
AGTCGTGTCGCTTTAGGCTGGTGCCGCTGTGCCGCTATTTGTGGTCGCTCTATGTTGACTCTGTCAATATGTGCGGGGGTGTTGTGGGTTATGTTTTTAG
ATCACACATTCTGGCTCTGTTTCGACTTGACTTAAATTTGTCTGTTCGCTTTCTTGTTGTTGTTGTTGTTTGCTGTTGTTGCGCTCACGTTTTGGTATGT
CGTTGTGTTTTGTTGTTTCGGATGGGTGTTTTTTGTGTTGGCTGTTGTTTTGCTTTTGTGGTGTCTATTCTGTTGCTGGCTCTTCTTCTTGCGTGGGGGT
CGTCTGTCTCTTTGCTTAATGTGTTCTTAGTTGGTTGCGTTGCTTTTGGTTTCTTGTACTCACGTTGTGTTGTTGTTGCTATTGGGCTGCGCTGTGTGTG
TCCTTATGTGGTGCTGGTTGCTGTATTATGCTCTGCCCTTGTCTTGTGTGCGATGCTGGTCAGCTCTACGCTCGTGACTGTGGTGCTGTTGATTACGCTG
ATGTAGCTTATCATCGTTGGTTTTTGTAGATGTGCTGTAGCTTGTTATGTCTCCTCCTTCCTGGCCGTGAGTTTGCTGCGTGGCGATGCTGTATAGTTCT
GCTGTGTTGGTTCTGTCGTGTTGTTTCTTCGGTGTGCTGTTAGTTGGTTGTTGCCCTTGCTGTTTTTCTTGTTACTGTGTGTTGTGTTCTTTCGACTCCT
GCTTTGTTTTGCGTTGTGTGTCGTGTTTTATGTGTTGTCTCTTTTTCTATTTGTCTCGTTTTACGTGCGTTTGTTCTTCGTTTTCTCTGTGACTCATTGT
TTACGCCTCTCTTCGTGTATTTTGTGTGTGAGGGTGCTGGTGTTA
>LE_HBa0184G14_SP6_126100 (trimmed for quality and cloning vector)
TT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.6809
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0184G14
Clone
Clone name
hba-184g14
LE_HBa0184G14
P184G14
Clone type
BAC
Contamination
none
Estimated length
85,580
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found