Clone Read LE_HBa0184B22_T7_257406

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0184B22_T7_257406
Primer
T7
ID from Seq. Facility
LE_HBa_184_B22-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
14 trimmed for vector and quality, 847 raw
Sequence
>LE_HBa0184B22_T7_257406 (raw untrimmed)
TATGTCGGAGTCTCTCAGTCCACTGAGGCGTGCACTGTTTTGCATCATCGGAACGTTCTGCCTCTTCCGACGCAGCTGATTGCGCTTATTCTATTTCTCC
ACCTCTGAACGACATTCCCGTCCTCGGTTGCTTATCATCCCTACCGGTGGCGTGTCGAGGGACTATGCAATCTATACACGGATGCTAATATTCTGAGGAC
CTCTACGGGTCTTCGACGCTAACACTGGTTCTTCAGATGTGATTTCGTACTGGAAGTCTTCCTTCTACGCTATGCACTCCTGACCTTTTCACCCTTCATC
GGGTAGAGTGGATTGCTCTGAGTTTCGGTCACCCCTCCTGGGCAGTGTGTGACATAGTTCTACGCCGCTTATGTGGCGACTCTCATGAATTCTTTGGACT
GGTAGGCTATGCCCGCCTCATCCTCTCCATTTGATCTTGTGCCTTCCCGTGGACCCTCGGCGGATCTCTCTTTG
CCCTCCATTCAAATCTTCTCATATGG
ATCTGTCCCTCTGACCATTTTGAATGCCACTTACATGTTCTACTATATCGTCGCTTTCCCCTCGAGAATCCTATCTAGTACGTGTATACCACAGAGATTC
TCTTGGGCTCGCAACTCTGCTGATGTGATCTGTGAATGTGCTATCTCCTACTACTTCCTTGTCCCGTCACATTACGAATCTGGATGCACTTATGCTTACT
GTTGACGAGCCTCTCCCTCATTGCCGCCGTAATCATTGCTTCTCGGGATCTCACATGGATTTACAACTTGCGGACTGACTTGGGGTGAATTCAATACCCC
GCTTAAGGTTGAAGAGGTCCTTCATCCTAGGTATTTACAGTTACAAA
>LE_HBa0184B22_T7_257406 (trimmed for quality and cloning vector)
CCCTCCATTCAAAT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.535436
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0184B22
Clone
Clone name
hba-184b22
LE_HBa0184B22
P184B22
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found