Clone Read LE_HBa0184B22_SP6_125988

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0184B22_SP6_125988
Primer
SP6
ID from Seq. Facility
LE_HBa_184_B22-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
6 trimmed for vector and quality, 1014 raw
Sequence
>LE_HBa0184B22_SP6_125988 (raw untrimmed)
GTTTTTTAAAAATGCNCACGTGGAGGGGGCGNCTTTGTCGGGTGTTTTTCTTTCGTTGTGTTCNGGTGCGGTGCCGCTCCGTCTTTTTCAATGAGCAAGA
GGGGGGCCGCGCCGGGGGGGNGCGCGNNGGGCGGNNGNNNCGNNCNGGGNGCGGNGGGCGGCGGGCGGGGGGGGCGGGGGGCGCGGCGGGCNGCGCCCCC
CCGGCGCCCCCTCCCCGGGNGGGNNGCNGNGCGCGGNCGNNGGCGGCGNGGNGNGNGCCCCCGGCGGGGGGGGCGGGGGGCGGGGCGGGCGCGGCGGGCN
GCGCCGNGCCGCGGCGCGNGCGGGGNGGGGGGGCCGCNCGCNGGCGGNCGGCGGCGGCGCCCGCGGGGCGCCCGCCGGCGGCGCGCGGCGGGCGGCGCGC
CGGGGGGGGCGCGGCGCGGCGGGCGGGGCGGCGGGGGCGGCGCGGGGCGGGCCCGGGCGGCCGCCGGCCNCCGGCGGCGGCGCGGCGGCCGCGGGCGGGG
GGGGGGGGGCGGGGGCGGGCGCNGCNNCCGGCCNGGCGGCNCGCGCGCGGCCGCGCCCCGCCGNCCCCGGCGCCGCCCGCCCGGNCCGCCCCCGCGGGGG
CGGGGGG
GGGGGGGGGGGGGGCCCGGGCGCGCGGCGGGGGGGGGGGGGCGCGGGCGGGGGCGGGGCGCGCGGNGGCGCGGGGCCGGCGNGGCGCCCGGCC
CGGCGCGGGGCGGGGGGCGGGCGCGGGCCCGGGCGCGGCCGGGGCGGNGGGGGCGGGGCGCCCGGCGCGGCGGCGGGCGCGGCGGGCGGCGGGGCGGGGG
GCGGCGGGCCGGCGGGGGGGCGCGCGGCGGGGCGGCCGGCGCCGGCGCGGGGCGGGGGGGCGGGCGGGCGGGGCCGGGGGCCGGGGGGCGCGGCCCCGGG
CGGGCGCCGCGGCCCCGGGGGGGGNGGGGCCGGGGCCGGCGCGNGGCGCCCGCCGGGCCGGGGGGCGGCGGCCGGGCCGCGGGGCCCGGGGGGGCGGGGG
GGGGGCGCGCCGCC
>LE_HBa0184B22_SP6_125988 (trimmed for quality and cloning vector)
GGGGGG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.3739
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0184B22
Clone
Clone name
hba-184b22
LE_HBa0184B22
P184B22
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found