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Clone Read LE_HBa0165P13_T7_256047

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0165P13_T7_256047
Primer
T7
ID from Seq. Facility
LE_HBa_165_P13-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1526 raw
Sequence
>LE_HBa0165P13_T7_256047 (raw untrimmed)
CCGCGCGGGAAGCCATCCTATCAAGTTAGAACCCACTGCCAGGGTCGAATGACTAGAGACCTTTGTATTCTATCATCTATATATAAAAGATTATACCCTC
AGCTCGTCACACGGTAGGCCCATGCTCAATACAGTAGAGTTCTCTTAAGTCTGCGCTGTCTACACTGTACGCATGTAACACTGTGTTACTGTCGCAGTGC
TCCTCACTACTTTCTAGCAGTCAGGCACACACCGTATCTGCGATGAGCACTCATAAGAAGTTCGGTGAAGACGCCAATGANGGCGTCTCGCGTAACTATA
CTTTGCAATCATACACAACTACACTCTACACATCTCTCTACGTCGCCTTCTTCATGACATCAACTTATCTCCAGATCTATGTACAACTCAATGTCTTAGT
CTCAAACTCGTCCGTGTGATCCGATTCCTAATCTATCCTCCGTAATCTCCCGAGCATCCTCTCACTAATGACTCCACATGCACCTCCTCTATCACATACC
CTTACTATCTCGTCTTCGGCTCACACCCTCCCGTCCATACCTCCCTCATACACGCTCTCTTTACCTTCCACCTCGCAGCGCCTTCCCTTTCTAACCTCAT
ATAATCTTCTCCTCCCATCTCTCCTTCTCCCACCTCCTCCTCTCTTTCTACACATTACTTCTCCATGCCTCCCCTCCCCCACCTACTCTCCACTCTCTAT
TCTCCCACCCACACTTCCATCACCTCGCCTGCTCCACCTCTCCAACTAAAATTCACTATCCACACTCACATCCACCCTTTTTCACTTTATTCCCTTACCA
TCTTCTACTCTCCTCTCTTGCTACTTTTAATCTCCTGCTTATATACTCATCTCACTCTCTCTCACACTTACTTCCCTCATCTCTATTGTCCTCATTCTTC
TCTCCTAATCCCCACTCTTCTCCTTTTACCGCTTCCTCTCTATCTCCATCTCTCCCCCACTTCTCTCACCCTCATCACCTACTTCTTCCTTCTATCTCTT
TCTCCTCCCCCTACTACCCATCTCCTCCATTCCTTCCCACCTCTCTCTCTCCACACCCTCCTTCTTCCCTTCTCCTCATCTCCTTCCCTCTCCCCTTTTC
CCTCTCACCTTCTCCTCTCCCTCCCCCCACTCATACCCTTCCTCCCTACTACTCTCTTTTCACTCGCTTACTCATACTCAACCTCTTCTCTCTCTCTCTT
CACCCTCATCCCCCTCCTTACGCTTCGTCGTTCTATCATCTTACTTCTCCTCCCACCTTCTCACTACTTCACTCTTCTTTCCGCCTCTTCCCTCCTTCTC
CTCACCACCCTATCTCACTCTCTTCTTCCTTCTCTCGCATCTCTTCCTTCTTCACCTATCTCACCCTCCTCTCCATACACCTCCTTACCTCTCTCTCTCT
CTCCTCTCTTCACTACACTCTTCTCCACTCTTCCTCTCTCCTCTCTTCACTTCTCCCTCTTCACCTCTATCACGACATCCTCTCCCTTCTTATCCCACAC
CTCTCCCGCATCCACTTCCCTCCCTN
>LE_HBa0165P13_T7_256047 (trimmed for quality and cloning vector)
CC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.50654
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0165P13
Clone
Clone name
hba-165p13
LE_HBa0165P13
P165P13
Clone type
BAC
Contamination
none
Estimated length
77,835
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found