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Clone Read LE_HBa0116H08_T7_253406

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0116H08_T7_253406
Primer
T7
ID from Seq. Facility
LE_HBa_116_H08-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 2125 raw
Sequence
>LE_HBa0116H08_T7_253406 (raw untrimmed)
CTATTCTACACTATCNTCTCACAATCTCGTCGACACACGNCGCCAGATTCGTACTAAACGCTCTTCCTTAAACGTACCGCTTCCTTCTCAAACATCACTT
CTGCCCAACTACCAACAACCACCCTACTTACATGACTTACACCATCGTCACTACATATGACTTATCTGCCGTCGTNAAGTTCCTTGCTCTACACACAACA
CACTATCTATATCATCACCCTTACCTTGTCACAATCTGCTGCAACTTTATCACCTATTGTACACATACTATCTCACCTACCCTACTCTCCTATATCGTCG
ACATCTCACTTACTTCCGCATCGATAGCGCACTAGATGTAAGCACTCACTGTCACTACACATATATCCTCTCTATACGACAATACCTCGTCTGTCACTCT
TATATCGCTGACATACAANACTACAACACTGACATCTACAAACTGTGACTAACAAAATCGTACAACAAACAATATATGTCGTGACAACATAACTGCCGAC
ACAGACGATTTCTCTGCTATGATATCATAATAATATATCTCATNACCCATATCTGTCTCTAATTTCATGCTGCCGACTATGATTTCATTGTCTCGCATGC
ATACACACTTCACCATACACATCTCTTCTCGCACTTCTACGCAATCAACACGTATATATCCTGTCACTACTCGAACTGCACAAATAATCTTCCCTCGCTC
TACTCCACATTCCCTCTATCATCATTACACCATCTACTCACCTCCTGTCTCCACCTCTCTACCAACATCATTCACTACAACTTCTCTCTCTATCTTTGCT
ACATCATATCATACTACCTTCCTACTCCTCTCTCTACCTCCCTCACTACACTCATACATTCTGCCTACATACTACATTACCACCTACTTTTCTACTGCAT
TCCGCACTAGATCTCGACTTNACCTCATCATCTACCATCTATATTCGTCCCTTCACCTGTTACACACAAACCAATATCGCTTGTATATATACCAACTTCT
GTGCTAAACACTCTACTCACCTATATCCTCAACTCGCACTCACCACCATTCTCATTCTGTAAACATACCTGCTATCCTGACTTTCAACTCAACATACTTA
CATCCTCTCCCTCATAACTCTAATCTAATTCACACTCACTCCTTCTGTCACTTCTACATNCTCACCCTACTTTACCGTCACACATACCTACTACCTCTCC
CACCATTCATTATCGCTCACCTACTCTCATCTCTCACAATTTCTCTCTCTTTACTTGCACCAATCTCTCCCTCAACATAACTCTTCACAATCCCTCATAT
CTCTACTACTAGCGTGTGCATATAAAACTCTTTGCTTAATACATCTCTCAATCCCATGCATCTCTTTATCTACACCTACTACTCTGTCACTCGTCTACAC
TCTCTTCTTCACTCTATCTCTCCATCTTCCCCTCTCCTCTCTCTGTCTCTTACGATCAATGCACTTCACTAATATATGCTCCCTCTCACATCTTCTAATT
CTTCCACAATTCCACCCTTCCTTTTCTTTTCGCACATCCTCTTACTCCCATTTCCTTCTTCCTCTCCCTCTCACTCTCCCACCTTCTCCTCTCCATCCTA
CCCTACATTCCTCTATCAACACCACTATCTCATCCTCTCTTCACACACATCTTTATATCCTTACTTAACAATATACTCACTCTTCTGCACATACCATCTC
ACTCTTCTCACTTTCTTTCTCATCATTTTTACTCCACCACCGCATGTCCTTTGCGTCTTCTACTCCTCTTTACTCACCCCTTCCTTTCACTCCACCTTCT
CTTCACCCTTATACTTCTCCCTCCACTCACTCTCAACCTTTCCACATCTCACTACTTTTACACCCTCCCCTATCCACTCATCCCCTCTCTCTCAACTCTT
CTTTCTGCTCAAACTTCTCTTCCCCTCACTACTCTGTCTATAATCTTTACCACCTCTCTTGCTCTCTTCATCACACATACTCCTCTCCCCTCTCTCCTAC
ATCTCCCCTCTCTTCTACCACTACCCACACTACCACCTACCATTCACTCTCTCTCCATACCATTAACACTTACCTCTCCTATTCACCCCATCCTTCTATA
TCCTCTATTACACACTCCTCTCCGC
>LE_HBa0116H08_T7_253406 (trimmed for quality and cloning vector)
TC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.04304
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0116H08
Clone
Clone name
hba-116h8
LE_HBa0116H08
P116H08
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found