Clone Read LE_HBa0084B10_T7_21955

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0084B10_T7_21955
Primer
T7
ID from Seq. Facility
LE_HBa_084_B10-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
145 trimmed for vector and quality, 864 raw
Sequence
>LE_HBa0084B10_T7_21955 (raw untrimmed)
ACCCGACCCCCTACCCGGGTCATCCTCTCTAGTCTACCTCGCCGCATGCAAGCTTGTACAATATTTAGATAGATGTTAAAAAGACCCTATAACATCGTAT
AAAATTAAGACTAGAAAAACTAGTAAATGTGTCCTCAAGAATGCAAAGAGACTCACCACTTACTACGAGTGCTCAGCTGGATCAACGAGGCGCGGGATGA
TGTTGATCCTGGTTACGTGCATATCCATCATGATACAATGTAGGTCAACTTGCATCATCACATTGAAGTACGAGTACGCCAGTTGGAATGCTAACCACCA
CTTAAGATTGAATAGAGTAAGACGTAACACTTACCTTGGCCCTACCCCCCCCATCAATAACGCCATTTACTATAAAGCACCTTAAACACATGCATTTTTT
TATTCTTGTTTTTCTTTTTTTTTTCTTTTTTTTCTTTTCTTTTACTTTTTTTCTTTACTCTTTTTTTTTTTTTTGTCTCTTTTTTTTCTTTCTTTTTTAT
ATTCTTTTTTTTTCTTCTTTTTCTTTTATCCTTTTTCTTTATCTTTTTTCTTTGTTTTCTTTTTTTTTTTTCTTTTTTTTTTTTCTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTCTTTTTTTTTTTTCTTTTTTTTTTTTTCCCCCTTTTTTTTCTACACTTGAATTATACCTTGCTTTCT
TCTGGCTCACTCAATGATTTTGATCCCTCCCCCCCTCCCCCAACACCCCATTTCGCCCTACACCCACCCCTCCTCCCTCTCCCCCTCCCCTCTCTCCCTC
TCTCTTCCCCGCCCCTGCTTTCTTCCCTTCCCCCCCCCCCATCTTCCCTCCCCTTTTCTTTCCC
>LE_HBa0084B10_T7_21955 (trimmed for quality and cloning vector)
CTTGTACAATATTTAGATAGATGTTAAAAAGACCCTATAACATCGTATAAAATTAAGACTAGAAAAACTAGTAAATGTGTCCTCAAGAATGCAAAGAGAC
TCACCACTTACTACGAGTGCTCAGCTGGATCAACGAGGCGCGGGA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.941486
Expected error %
1.82789
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0084B10
Clone
Clone name
hba-84b10
LE_HBa0084B10
C02HBa0084B10
P084B10
Clone type
BAC
Contamination
none
Estimated length
94,257
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found