Clone Read LE_HBa0084B10_SP6_21954

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0084B10_SP6_21954
Primer
SP6
ID from Seq. Facility
LE_HBa_084_B10-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
389 trimmed for vector and quality, 837 raw
Genbank Accession
Sequence
>LE_HBa0084B10_SP6_21954 (raw untrimmed)
AAAACGTTTCCTCCAATCTAGTTGACNNNNNNCNNNNNNNNNNNTNNNGNNANTNGTCNGTANNTANCTTACTTCNCACTTGACGAGGGGTGATGAAACT
TGCTTAGTTAGTTAATCAGCTCAAGTACTTTGTTAGTTACTAATTAGCTAGTTAGTTAAAGTTAGTTATAGTTAGTTAAAGTTAGTTAGAAGTCACATTT
TCTACATTTTTGTTAGTTTGTTAAATCTGTTAGGTTGTTGTTCATTGTTGTGTATATATACACACACATTACATTGATCAAGATAAGAGAGCATATTCTA
ATAGAGCTTCTTCTTCTTTTCTTCTTCTTCTTCTTCGTTGGATGCTGATGGCTCAACCTCCATTAATGGAGGAATGAGATTTTTCCCAGCTTACATGCTG
GTTTTATCAAGGTTAAACACTTTTCAATTGAAGGTTTTGAATCAAATATACTCTTTTTGTGTGTCCTTCCTTAAGAACACCATGAATATAACTAACATAA
CAACTTTTTTTTTTTCAACATATTCACTTTTTTGTGAATTCGTCTCGAATTTTGGCCACATCCATTAAAATTCAAAATTCTAAAATCGTTTTGTAATTTT
TTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTATTGTTTTTTTTCTCGTGTTCTTTGTTTTGTTTTTTT
TCTTCGTTTTTTTGTTTCTCTTTTTTTTTTTTTCTTTTTTTTCTTTTTTTTTTTTTTTTCTTTTTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTCCAT
TTTTTTTTCTTTTGCACAAATTATTTCATATCTTCTC
>LE_HBa0084B10_SP6_21954 (trimmed for quality and cloning vector)
AGGGGTGATGAAACTTGCTTAGTTAGTTAATCAGCTCAAGTACTTTGTTAGTTACTAATTAGCTAGTTAGTTAAAGTTAGTTATAGTTAGTTAAAGTTAG
TTAGAAGTCACATTTTCTACATTTTTGTTAGTTTGTTAAATCTGTTAGGTTGTTGTTCATTGTTGTGTATATATACACACACATTACATTGATCAAGATA
AGAGAGCATATTCTAATAGAGCTTCTTCTTCTTTTCTTCTTCTTCTTCTTCGTTGGATGCTGATGGCTCAACCTCCATTAATGGAGGAATGAGATTTTTC
CCAGCTTACATGCTGGTTTTATCAAGGTTAAACACTTTTCAATTGAAGGTTTTGAATCAAATATACTCTTTTTGTGTGTCCTTCCTTAA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.906753
Expected error %
0.0699162
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0084B10
Clone
Clone name
hba-84b10
LE_HBa0084B10
C02HBa0084B10
P084B10
Clone type
BAC
Contamination
none
Estimated length
94,257
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found