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Clone Read LE_HBa0161D01_T7_201350

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0161D01_T7_201350
Primer
T7
ID from Seq. Facility
LE_HBa_161_D01-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
626 trimmed for vector and quality, 796 raw
Sequence
>LE_HBa0161D01_T7_201350 (raw untrimmed)
GCTTGGTCCCGGTGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTCCGCAATATAGGGTTCTATTATAGATAACAATTATCACGTATCTTTATAAG
AGACTGTTTTCACATTCTGTATATTACGGGACAACAATTTATAAACATATAATAGTATTTTGAAATTTCATGATAACAACTATTTGTCAATTATAAGGAC
CGAAAAGTGATTATTTGCGAATTATATCTCATAATTAATTCTTATTTTGTTTGATTTCTCTTGTAATTTAAAAAAAAACAGTATGAATTTGGGCTGAAAT
CTTGTTTCCATGACCAAACTGAGGACATCGTAATTAGAATGACAATGGGGTTAGTATTAATTATTTTCTAATTTATAATTAAAATTTTATTAATTTGATC
CAATTTACTTACATATAAAAATGGTTTGATTTAATTTTTGGTGCAGGGTTCTTATTCAGATTCTTTGCAGCTATGTTACTCTTCCATTATATGCTCTTGT
AACACAGGTAAATTAAGTTATATATATCGTCAACGTAAATTTTTGTTTTTATCTCATAAGATTACATTTGAATATACATCTCGTTTTATTTTTAAGATTA
TTAATCTCGCATTTAAAGTTTCCAAGTCACAAATAACTATAACATAATAATAACGAATTTTTAACAACTCCTAGATTTTACGTTGGTGTTTGAACATAAT
CAATTTATCTGAATTTTGATTTAAGTATAAATTTTTATTTTCTTTTTTTAAAGCTATTTGTTATCATTTTTATTTATTATTCTTTTCCTTTCTTCT
>LE_HBa0161D01_T7_201350 (trimmed for quality and cloning vector)
AGCTTCCGCAATATAGGGTTCTATTATAGATAACAATTATCACGTATCTTTATAAGAGACTGTTTTCACATTCTGTATATTACGGGACAACAATTTATAA
ACATATAATAGTATTTTGAAATTTCATGATAACAACTATTTGTCAATTATAAGGACCGAAAAGTGATTATTTGCGAATTATATCTCATAATTAATTCTTA
TTTTGTTTGATTTCTCTTGTAATTTAAAAAAAAACAGTATGAATTTGGGCTGAAATCTTGTTTCCATGACCAAACTGAGGACATCGTAATTAGAATGACA
ATGGGGTTAGTATTAATTATTTTCTAATTTATAATTAAAATTTTATTAATTTGATCCAATTTACTTACATATAAAAATGGTTTGATTTAATTTTTGGTGC
AGGGTTCTTATTCAGATTCTTTGCAGCTATGTTACTCTTCCATTATATGCTCTTGTAACACAGGTAAATTAAGTTATATATATCGTCAACGTAAATTTTT
GTTTTTATCTCATAAGATTACATTTGAATATACATCTCGTTTTATTTTTAAGATTATTAATCTCGCATTTAAAGTTTCCAAGTCACAAATAACTATAACA
TAATAATAACGAATTTTTAACAACTC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.889518
Expected error %
1.01678
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAX31277.1| Score 51 E Value 4e-12 Identity 95.70% Align. Length 225bp (35.94%) Frame 2
MLO1 [Capsicum annuum]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0161D01
Clone
Clone name
hba-161d1
LE_HBa0161D01
C11HBa0161D01
P161D01
Clone type
BAC
Contamination
none
Estimated length
90,434
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found