Clone Read LE_HBa0155E05_T7_200638

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0155E05_T7_200638
Primer
T7
ID from Seq. Facility
LE_HBa_155_E05-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
122 trimmed for vector and quality, 806 raw
Sequence
>LE_HBa0155E05_T7_200638 (raw untrimmed)
TTTTCGCCCTCAGATGGCGCAAAATCCGACATTGATNATACATCACATAATTTAGAAAAGGCATAGGATTTACATGGGGTTCATACGGGAATAATCATAA
AACCATAGAATTTCATCAATTCATGCATAAGAGGTCATAATTCCATCAATTAAATCAATAATCAAGAGAACCCATACCATAGAAGAAAACCCTAACTCAA
TTGGGAAATTTTAACTTTGAAAATACGAGAATTGTGTGAATGGAAGGAATCCTTATATGCTTTCTATCATATTCGGAGTCCTTAGTCGTTAGCTTTGTGT
GTTCTTCTTTCAACAAGCCGTCGCCGGCCGTGCGTGGGCATTACGGACGTTGTTTACAAGCGACAACGATTGATGACGAAAAACAGAGGACGGAACGCCT
CTCCCATAATCTCGTAGTATAGTATCAATACTTTTTGTTGGCTTCTTTTCTTCCTTATTGGTGTATCCGGTGGTGCTTTCTTCTGTGTGGGGCCTCTAGT
CGTGCACTTCCTCCTACATGACCTCACAGATCGTTTATACTTCCTTTTGCTTTTTCTGCTATATGTTTCTTTGTCTTTCATCGTGTGGCTTTTCTGATCC
TTGTTATTGAGTCTAATTATGACTAGTACATATAAGACTGTGTTTACTTGTTGCTCTTTTCTGATTAGTCTGCCTTCGTTTTTTTGCATTTTTATTTTCA
TTCAGTCTGAATGTCTGCTAGTTCTATTCTACGTCATATGAATTACTTATCTGGCGCGATTTACGAGATTATTACCTCTCTCGCTGCTTGGGTGTGGCGT
GGTGGT
>LE_HBa0155E05_T7_200638 (trimmed for quality and cloning vector)
TAAAACCATAGAATTTCATCAATTCATGCATAAGAGGTCATAATTCCATCAATTAAATCAATAATCAAGAGAACCCATACCATAGAAGAAAACCCTAACT
CAATTGGGAAATTTTAACTTTG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.884204
Expected error %
0.703984
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0155E05
Clone
Clone name
hba-155e5
LE_HBa0155E05
C02HBa0155E05
P155E05
Clone type
BAC
Contamination
none
Estimated length
138,754
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found